Mus caroli (Ryukyu mouse): 110287103
Help
Entry
110287103 CDS
T05910
Symbol
Opn1lw
Name
(RefSeq) long-wave-sensitive opsin 1 isoform X1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mcal04030
]
110287103 (Opn1lw)
G protein-coupled receptors [BR:
mcal04030
]
Rhodopsin family
Vision
Opsin
110287103 (Opn1lw)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srt
7TM_GPCR_Srw
DUF3810
Motif
Other DBs
NCBI-GeneID:
110287103
NCBI-ProteinID:
XP_021009440
Ensembl:
MGP_CAROLIEiJ_G0033171
UniProt:
A0A6P5P5V0
LinkDB
All DBs
Position
X:69135545..69194805
Genome browser
AA seq
389 aa
AA seq
DB search
MAQRLTGEQTLDHYEDSTHASIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSTWMILVVI
ASVFTNGLVLAATMRFKKLRHPLNWILVNLAVADLAETIIASTISVVNQIYGYFVLGHPL
CVIEGYIVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLATVGIVFSWVWAAIWTA
PPIFGWSRYWPYGLKTSCGPDVFSGTSYPGVQSYMMVLMVTCCIFPLSIIVLCYLQVWLA
IRAVAKQQKESESTQKAEKEVTRMVVVMVFAYCLCWGPYTFFACFATAHPGYAFHPLVAS
LPSYFAKSATIYNPIIYVFMNRQALVHASFETASYSSLERRLMIALNFPAPPRQKSHLSL
QCHLHKVCLQPVPSIKALAMFYLPSHISL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaaggcttacaggtgaacagacactggaccactatgaggatagcacccatgca
agcatcttcacctataccaacagcaacagcaccagaggtccctttgaaggccccaattat
cacattgctcccaggtgggtgtaccacctcaccagcacctggatgattcttgtggtcatt
gcatctgtcttcactaatggacttgtgctggcagccaccatgagattcaagaagctgcgc
catccactgaactggattctggtgaacttggcagttgctgacctagcagagaccattatt
gccagcactatcagtgttgtgaaccaaatctatggctacttcgttctgggacaccctctg
tgtgtcatagaaggttacattgtctcattgtgtggaatcacaggcctctggtccctggcc
atcatttcctgggagagatggctggtggtctgcaagccctttggcaatgtgagatttgat
gctaagctggccactgtgggaatcgtcttctcctgggtctgggctgctatatggacggcc
ccaccaatctttggttggagcaggtactggccttatggcctgaagacatcctgtggccca
gacgtgttcagcggtacctcgtaccccggggttcagtcttatatgatggtcctcatggtc
acgtgctgcatcttcccactcagcatcatcgtgctctgctacctccaagtgtggctggcc
atccgagcagtggcaaagcaacagaaagaatctgagtccacccagaaggccgagaaggag
gtgacacgcatggtggtggtgatggtcttcgcatactgcctctgctggggaccctatact
ttctttgcatgctttgctactgcccaccctggctatgccttccaccctcttgtggcctcc
ctaccatcctactttgccaaaagtgccactatctacaaccccattatctatgtctttatg
aaccggcaggccctggtgcatgccagtttcgaaactgcatcttacagctctttggaaaga
aggttgatgatagctctgaactttccagcacctccaagacagaagtctcatctgtctctt
cagtgtcacctgcataaagtctgcctccaacctgtcccatccatcaaagctttggccatg
ttttacctcccttctcatatatccttgtga
DBGET
integrated database retrieval system
