KEGG   Mus caroli (Ryukyu mouse): 110287372
Entry
110287372         CDS       T05910                                 
Name
(RefSeq) elongin-C-like isoform X1
  KO
K03872  elongin-C
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04066  HIF-1 signaling pathway
mcal04120  Ubiquitin mediated proteolysis
mcal05170  Human immunodeficiency virus 1 infection
mcal05200  Pathways in cancer
mcal05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110287372
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    110287372
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110287372
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    110287372
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110287372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110287372
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110287372
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     110287372
   Cul5 complex
     110287372
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110287372
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 110287372
NCBI-ProteinID: XP_029329442
Ensembl: MGP_CAROLIEiJ_G0012538
UniProt: A0A6P7QMD3
LinkDB
Position
X:9111562..9121503
AA seq 116 aa
MEERLSEEKTYGGFDGHDATMYMRLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENE
TNEVNFREIPSHVLSKVCVYFIYKVHYTNSSTEIPEFPAAPETSLELLMATNFPDC
NT seq 351 nt   +upstreamnt  +downstreamnt
atggaagagagactctcagaggagaaaacctatggtggctttgatggccatgatgctact
atgtatatgagattaatatcttctgatggtcatgaatttattgtaaaaagagaacatgca
ttaacatcaggaacaataaaggccatgctgagtggtccaggtcagtttgcggagaatgaa
accaacgaggtcaattttagagagatcccttcacatgtgctatcaaaagtgtgtgtgtat
tttatctacaaggtccactatactaacagctctactgaaattcctgaatttccagctgca
cctgaaacttcattggaacttctgatggccacaaacttcccagattgttaa

DBGET integrated database retrieval system