Mus caroli (Ryukyu mouse): 110288114
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Entry
110288114 CDS
T05910
Symbol
Lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04360
Axon guidance
mcal04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110288114 (Lrrc4c)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110288114 (Lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110288114 (Lrrc4c)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
NGL family
110288114 (Lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
110288114
NCBI-ProteinID:
XP_021010221
Ensembl:
MGP_CAROLIEiJ_G0023999
UniProt:
A0A6P7QNI1
LinkDB
All DBs
Position
2:90201256..91450845
Genome browser
AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcaacttcttgtggtggctggt
ctggttcgggctcaaacctgcccttcagtgtgctcttgtagcaaccagttcagcaaggtg
atttgtgttcggaaaaaccttcgtgaagttccggatggcatctccaccaacacaaggctg
ctgaacctccatgagaaccaaatccagatcattaaagtgaacagcttcaagcatttgagg
cacttggaaatcctccagttgagcaggaaccatattcgaaccattgaaatcggggccttc
aatggtctggccaacctcaacaccctggaactctttgacaatcgtcttactacaataccg
aatggagcttttgtatatttgtctaaactgaaggagctctggttgaggaacaaccctatt
gaaagcatcccttcctatgcttttaacagaatcccttctttgcgccgcctggacttaggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaacctccgggaaatccctaacctcacaccactcatcaaa
ctagatgagctagatctttctgggaaccatttgtctgcaatcaggcctggctcttttcag
gggttgatgcaccttcaaaaactgtggatgatacagtctcagattcaagtgattgaacgg
aatgcctttgataaccttcagtcactagtggagataaacttggcacacaacaatctaaca
ttattgcctcatgacctcttcacacccttgcatcatctagagaggatacatctccatcac
aacccgtggaactgtaactgtgatatcctgtggctcagctggtggataagagacatggcc
ccctccaacacagcttgttgtgccaggtgtaacactccccccaacctgaaagggaggtac
atcggagagctggaccagaattactttacgtgctatgctcccgtaattgtggagccccct
gcagacctcaatgtcactgaaggcatggcagctgagctgaaatgtcgggcatctacgtcc
ctgacttccgtatcttggattactccaaatggaacagtcatgacccacggggcatacaaa
gtgcggatagctgtgctcagcgacggtactttaaattttacaaatgtaactgtgcaagac
acaggcatgtacacatgtatggtgagtaattctgttggcaacaccactgcttctgccacc
ttgaatgttactgcggcaaccactactccgttctcgtacttttcaactgtaacagtagag
actatggaaccttctcaggatgaggcacggaccacagataacaatgtgggccccactcca
gtgattgattgggagaccaccaatgtaaccacatcccttacgccacagagcacaaggtcg
acagaaaaaacattcaccatcccagtaactgacatcaacagcggaatcccaggaattgat
gaggtcatgaaaacaactaaaatcattattgggtgttttgtggccatcacactcatggct
gccgtgatgttggtcattttctacaagatgaggaaacagcaccatcgacaaaaccaccat
gctccaacaaggactgttgaaatcattaacgtggatgatgagatcactggggacacgccc
atggaaagccacctgcccatgcctgcgattgagcatgagcacctaaaccactataactct
tacaaatctcccttcaaccacacaacaacagtaaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccgaatgaactctaaagacaatgtacaagagactcagata
taa
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