Mus caroli (Ryukyu mouse): 110288243
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Entry
110288243 CDS
T05910
Name
(RefSeq) aly/REF export factor 2-like
KO
K12881
THO complex subunit 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal03015
mRNA surveillance pathway
mcal03040
Spliceosome
mcal05014
Amyotrophic lateral sclerosis
mcal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110288243
09122 Translation
03013 Nucleocytoplasmic transport
110288243
03015 mRNA surveillance pathway
110288243
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110288243
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110288243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110288243
03041 Spliceosome [BR:
mcal03041
]
110288243
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110288243
TREX complex
110288243
Spliceosome [BR:
mcal03041
]
Complex C
Other components
EJC/TREX
110288243
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110288243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
TFIIA
Pinin_SDK_memA
EOS1
DDHD
MRP-S26
DUF7500
Motif
Other DBs
NCBI-GeneID:
110288243
NCBI-ProteinID:
XP_021010299
UniProt:
A0A6P5P2E7
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MLDPRPAMADKIDMSLEDIIKLNKIQQGHHGRPDYRVNRGTRPKKYGPPVTHGGRKRLPP
YCRPKQLSDKWQHDLFIGDFMGQTHVDTGGKLFVSNLHFGVSDADIQLLFAEFGTLKKSA
VHYDRCGRSLGTAHLHFEREADALNAMREYNGASLDGRPMNIQLVTSKIDRQGRPAQSRN
RGGMKRNPGSGGLSGXGTKRWTLGGSQGREKGGTSRNSKLQQQKKKQLEQQQQQQEQQEQ
QQEQQQEQQQEQQQQHISKEELDVQLDDYQEIMDSSYTTEQSCTRSGPRA
NT seq
872 nt
NT seq
+upstream
nt +downstream
nt
atgctggatccaaggcccgccatggctgacaaaatagacatgtctttggaagacatcatt
aagctgaacaagatccagcaaggacatcatggcaggcctgattaccgggtgaatcgaggc
actagacctaagaagtatgggccacctgtcacccatggtggaaggaaaaggcttccacca
tactgcagaccaaaacaactttcagacaagtggcagcatgacctattcattggagacttc
atgggtcaaacccacgtggatactggtgggaagctgttcgtgtcaaatctgcacttcgga
gtgtcagatgctgatattcagctactctttgctgaatttggaacgttgaaaaaatctgct
gtgcactatgatcgctgtggaagaagtttagggacagcacatctgcactttgaaagggaa
gcagatgccctgaacgccatgagagagtacaatggcgcctctttggatggccgccctatg
aacatccagcttgtcacctcaaagattgatagacaaggaagacctgcacaaagcagaaac
aggggtggcatgaaaagaaaccctggctctggaggattaagtggtncaggcaccaagaga
tggacacttggaggcagccagggaagagagaaaggaggcaccagcaggaactcaaaactg
cagcagcagaagaagaagcagttggagcagcagcaacagcagcaggagcaacaagagcag
cagcaggagcagcagcaggagcagcagcaggagcagcagcagcagcacatatctaaagag
gagcttgatgtccagctggatgattatcaggaaattatggacagcagctacacaactgag
caaagctgcacaagatcgggacccagagcctg
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