KEGG   Mus caroli (Ryukyu mouse): 110288362
Entry
110288362         CDS       T05910                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03013  Nucleocytoplasmic transport
mcal03015  mRNA surveillance pathway
mcal03040  Spliceosome
mcal05014  Amyotrophic lateral sclerosis
mcal05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110288362
  09122 Translation
   03013 Nucleocytoplasmic transport
    110288362
   03015 mRNA surveillance pathway
    110288362
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110288362
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110288362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110288362
   03041 Spliceosome [BR:mcal03041]
    110288362
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110288362
    TREX complex
     110288362
Spliceosome [BR:mcal03041]
 Complex C
  Other components
   EJC/TREX
    110288362
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110288362
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT DUF5860
Other DBs
NCBI-GeneID: 110288362
NCBI-ProteinID: XP_021010386
UniProt: A0A6P5P869
LinkDB
Position
Unknown
AA seq 238 aa
MHSMVDKMDMSLEDIIKLNKIQQGLHGRPDSWVNRGTGPKRYRPAIQHGSRNRLAPYHRP
KQLPDKWQHDLFVGSFKAGNHMDTGGKLLLSNLHFGVSDYDIQKLFAEFGTLRNSAVHYD
RSGQSLGTAHVHFERKADALKAMREYNGVPLDGCPMNIQLVTSQIDTQRRYAQRRNRGSM
TSNLGSGRFGGGDTRRGTLGGSQGTWRGTSRNSKQQQQLSAEELDAQLDAYQERIDTS
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcactccatggttgacaaaatggacatgtctttggaagatatcattaagctaaacaag
atccagcaaggacttcatggcaggcctgattcctgggtgaatagaggcactgggcctaag
aggtacaggcctgccatccagcatggcagcaggaacaggctggcaccataccacagacca
aaacaacttccagacaagtggcagcatgacctctttgttggcagcttcaaggctggaaac
cacatggatactggtgggaagctgctcctgtcaaacctgcacttcggagtgtcagattat
gatattcagaaactctttgctgaatttggaacgttgagaaattctgctgtgcactatgat
cgctctggacaaagtttagggacagcacatgtgcactttgaaaggaaggcagatgccctg
aaggctatgagagagtacaatggcgtccctttggatggctgccctatgaacatccagctt
gtcacctcacagattgatacacaacgaagatatgcacaaagaagaaacaggggcagcatg
acaagtaaccttggctctggaaggtttggtggtggagacaccagaagagggacacttgga
ggcagccagggaacatggagaggcaccagcaggaactcgaagcagcagcagcagctatct
gcagaggagttggatgcccagctggatgcttatcaggaaaggatagacaccagctaa

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