Mus caroli (Ryukyu mouse): 110288454
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Entry
110288454 CDS
T05910
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal05014
Amyotrophic lateral sclerosis
mcal05200
Pathways in cancer
mcal05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110288454 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110288454 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
110288454 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110288454 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110288454 (Tpr)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110288454 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
110288454
NCBI-ProteinID:
XP_021010479
Ensembl:
MGP_CAROLIEiJ_G0014688
UniProt:
A0A6P5P8H2
LinkDB
All DBs
Position
1:141148734..141208269
Genome browser
AA seq
2436 aa
AA seq
DB search
MPSGGSASRSGHRGVPMTSRGFDGSRRGSLRRAGARETASEAADGAAPAAGLRASPCSLA
SPSAAAAAAAIPADMAAVLQQVLERPELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKF
KVESEQQYFEIEKRLSQSQERLLSETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRN
LGIQSQFTRAKEELEAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKL
DELQASDVAVKYREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCNL
ENKKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLS
NLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKI
GKLEKELDNANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQ
DQLLLEKQENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQ
RLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADI
SSSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENS
LTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLLSTPKRSS
TSQTVSTPAPEPVIESTEAIEAKAALKQLQEIFENYKKEKIDSEKLQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINL
HLNTKELLKNAQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEE
QVNDLKERLKTSTSNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEK
KLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSTVQNEVQEALQRASTALSNEQQARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQKAESQLLE
CKASWEERERVLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKDVVQAPLNISL
NEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAER
EKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQQLINQQKDPDTEEYRKLLSEKEIHTK
RIQQLNEEVGRLKAEIARSNASLTNNQNLIQSLREDLSKARTEKEGIQKDLDAKIIDIQE
KVKTITQVKKIGRRYKTQFEELKAQQNKAMETSTQSSGDHQEQHISVQEMQELKDTLSQS
ETKTKSLEGQVENLQKTLSEKETEARSLQEQTVQLQSELSRLRQDLQDKTTKEEQLLQQM
NEKHEKTWKALTLAKSRIAHLSGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREHQERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPT
ANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNLTTTPTATVMPTTQVESQ
EAMQSEGPVEHVPVFGNASGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQI
EPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEAGDQV
SEDTVEIPLPKKLKTVTPVGTEEEVMAEESTDGEAETQAYNQDSQDSIGEGVTQGDYTPM
EDSEETSQSLQIDLGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEED
EEEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAES
NQRAADSQNSGEGNTSAAESSFSQEVAREQQPTSASERQTPQAPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVF
VEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVR
LQTTLRQGVRGRQFNRQRGISHAMGGRGGINRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgccctctggtggctcggcttctaggagtggccacagaggagtacccatgacatcccgg
ggttttgacgggtcccgccgcgggagtctcaggcgggcaggcgcgcgggagaccgcgagc
gaggcagcggacggggcggctccggcggctgggctccgcgcttctccttgctccttggct
tctccttcagccgctgcggctgctgccgcgatcccggccgacatggcggctgtgttgcag
caagtgctggagcgcccggaactgaacaaactgccgaagtcgacgcagaacaaacttgag
aagttcctggccgagcagcagtcggagatcgactgcctgaaggggcggcacgagaaattt
aaggtggagagtgaacaacaatactttgagatagagaagaggctctcccagagtcaggag
aggcttctcagtgagacccgggagtgtcagaacctgaggctggagcttgagaagctaaat
aaccaagtaaaagtgttaactgaaaaaaacaaagaactggaaactgctcaagaccgtaat
ctaggcattcagagccagtttacaagagcaaaggaagagttagaagctgaaaaaagagat
ttaatcagaaccaatgagaggttatctcaggaagttgaatatttaacagaggatgttaaa
cgtctaaatgaaaaacttaaagaaagcaatacgacgaagggtgaacttcagttaaaactg
gatgaacttcaagcttctgatgttgctgtgaagtatcgagaaaaacgcttagaacaagaa
aaggaattgctacacaatcaaaattcatggctgaacacagagttgaaaaccaaaactgat
gagctgttggctctaggaagagaaaaaggaaatgaaattctggaacttaagtgtaatctt
gaaaacaaaaaagaagaggttttgagactggaagaacagatgaatggcttgaaaacatca
aatgaacatcttcagaaacatgtagaggatttgttgacaaaattaaaagaggccaaagaa
cagcaggccagtatggaagagaaattccacaatgagttaaatgctcacataaagctctct
aacctctacaagagcgctgctgatgactcagaggcaaagagtaatgagctaacccgggca
gtggacgagctgcacaaactgctcaaagaagcaggagaagccaacaaaacaatacaagat
catcttctacaagtggaagaatctaaagatcagatggaaaaagaaatgcttgagaaaata
ggaaaattggagaaggaattagacaatgcaaatgacctgctttctgctacaaaacgtaaa
ggagctatattgtctgaagaagagcttgcagccatgtctcccaccgcagcagctgtagct
aaaattgtaaagcctggcatgaaattaactgagctatataatgcttatgtggaaactcag
gatcagttacttttggaaaaacaagaaaataaaaggattaataagtatctggatgagata
gtaaaagaagtggaagccaaagcaccgattttgaaacgccagcgggaagagtacgagcgt
gcacagaaagctgtggccagtctttctgcaaagcttgagcaagctatgaaggagattcag
cgattgcaggaggacactgataaagccaacaaacattcatcagtacttgaaagggacaat
cagagaatggaaatacaaataaaagacctttcgcaacagattagagtgctcttgatggaa
cttgaagaagccaggggtaaccatgtaattcgggatgaggaggtcagctctgctgatatc
agtagttcgtctgaagtgatttcgcagcacctagtatcttacaggaatattgaagagctt
cagcagcagaatcagcgtctgctattcgctcttcgagaacttggggaaaccagggaacga
gaagaacaagagacaacatcctctaaaattgctgaacttcaacataaacttgagaactct
ctcactgaactggaacagctccgtgagtcacgacaacatcagatgcagcttgttgattcc
atagtgcgtcagcgtgacatgtaccgaattttattgtcacaaacaacaggaatggccatt
ccattacaagcttcaagtttagacgatatttctcttctctcaactccaaaacgttcaagt
acatcacagactgtttccactcctgctccggaaccggtcattgaatccacagaggctata
gaagcaaaggctgcccttaaacagttgcaggaaatctttgagaactataaaaaagaaaaa
atagacagtgagaaacttcaaaatgagcagctagagaaacttcaagagcaagtcacagac
ctgcgctcacaaaacaccaaaatttctactcagctagattttgcttctaaacgttacgaa
atgctgcaagataatgtagaaggatatcgccgagaaataacatctctacaagagagaaat
cagaaactcactgcaactactcagaagcaggaacaaatcatcaacacaatgacgcaagac
ttgagaggagccaatgaaaagctagcagttgcagaagtaagagcagaaaatttgaagaag
gaaaaagaaatgcttaaattgtctgaagtccgtctttctcagcaaagagagtctttgtta
gctgaacagagggggcagaacttgttgctgactaatctacagacaatccagggcatacta
gagcgatctgagactgaaaccaaacaaaggctgagtagccagatagaaaaactggagcat
gagatctctcacctgaagaagaaattggaaaatgaggtggaacaaagacacacgcttacg
aggaatctagacgttcaactattagataccaagagacagctagatacagaaataaatctc
catcttaacacaaaagaactgttaaaaaatgctcagaaggacattgctacactgaaacag
caccttaataatatggaagcccagctcgcttcacagtccacacagagaaccggtaaaggt
cagcctggtgacagagatgacgttgatgatcttaaaagtcagctaaggcaggctgaagaa
caggtcaatgacttgaaggagagactgaagacaagtactagtaatgtggagcagtatcga
gccatggtgaccagcttagaagattccctgaacaaggagaaacaggtgactgaggaggtt
cataagaacattgaagttcgcttgaaagaatcagcagagtttcagacacagttggagaag
aaattgatggaagtagagaaggaaaagcaagaacttcaggatgacaagaggaaagccatc
gagagcatggaacaacaattaagtgaattgaagaaaacactgtctactgttcagaatgaa
gtacaagaagctcttcagagagcaagcacagctttaagtaatgaacagcaagccaggcgt
gactgtcaggaacaagctaaaatcgctgtggaagcccagaataagtatgagagagaattg
atgctacatgctgctgatgtcgaagctctgcaagctgccaaggaacaggtttcaaaaatg
acatcaatccgtcagcatttggaagaaacaactcagaaagcagaatcccagctgttggaa
tgtaaagcatcttgggaagagagagagagagtgttgaaggatgaagtttccaaaagtgtg
tctcgctgtgaagatctagagaaacaaaaccgactacttcatgatcaaatcgaaaaatta
agtgacaaggtggtcacctctatgaaggatgttgtgcaagcaccattaaatatatctctc
aatgaagaagggaaatctcaagaacaaattttagaaattcttagatttattcgacgagaa
aaagaaattgctgaaactaggtttgaggtggctcaggttgagagtctgcggtatcgacaa
agagttgaactgctagaacgggagttgcaagaactgcaggatagcctgaatgcggaaagg
gaaaaggtgcaggtaactgcaaaaacaatggcgcaacatgaagagctgatgaagaaaact
gaaacaatgaacgttgttatggagaccaacaagatgctacgggaggaaaaggaaaggctc
gaacagaacctacaacaaatgcaagccaaggtgaggaaactggagttagacattttaccc
ttacaagaagccaatgctgagctgagtgagaaaagcggcatgctccaggcagaaaagaag
ctactggaagaggatgttaagcgttggaaagcacggaaccagcaactaataaatcaacag
aaagatccagatacagaagaatatcgaaagttgctttctgaaaaggaaattcacactaag
agaatccaacagctaaatgaagaagttggaaggcttaaggctgaaattgcaagatcaaat
gcatccttgactaacaaccagaatttaatccagagtctgagggaagacttaagtaaagca
cggactgaaaaggaaggcattcagaaagatttggatgccaaaataattgatatacaggaa
aaggtcaaaacaatcactcaagtcaagaaaattggacgcaggtacaagactcagtttgaa
gaactgaaagcgcaacaaaataaggccatggagacttccactcagtcttcaggagaccat
caggagcagcacatctctgtccaggaaatgcaggagctcaaagataccctcagccagtcc
gaaacaaagacaaagtcacttgagggtcaagtagagaatctgcagaagacattatctgaa
aaagagacagaagcaagaagtctccaggaacagacggtgcagcttcagtctgaactgtca
cgccttcgtcaggacctccaggataaaaccacaaaggaggagcagctcctacagcaaatg
aatgaaaagcatgaaaaaacttggaaggcacttacactagccaaatcaagaattgcacac
ctatctggtgtgaaagatcagctgactaaagaaaacgaagagcttaaacaaaggaacgga
gctctagatcagcagaaagatgagcttgatgtccgaatgactgcgcttaagtcccagtat
gaaggtcggattagtcgcttagagagagagctcagagagcatcaagagcgacaccttgag
cagagggatgagcctcaagaacccactaataaggctccagaacagcagagacaaatcaca
ctgaaaaccactccagcttctggtgaaagaggaattgccagcacatcagacccaccaaca
gccaatatcaagccaactcctgttgtttctactccaagtaaagtgacagctgcagctatg
gctgggaataagtcgacacccagggcaagtattcgcccaatggttacacctgcaacggtg
acaaatctgaccactaccccaacagccaccgtaatgcctactacacaggtggagtcacag
gaagctatgcagtcagaagggcctgtggaacatgttccagtatttggaaacgcaagtgga
tctgttcgttctactagtcctaatgttcagccctccatttctcagcccatcctaactgta
cagcagcaaacacaagctacagcttttgtacaacccactcaacagagccacccgcagatt
gagcctacaaatcaagaattgtccccaaacatagttgaggtagtacagagttccccagtg
gagcggccatctacttccacagcagtgtttggcactgtttcagctaccccaagttcctcc
ttgccaaagcgcactcgggaggaggaagaggacagcaccatggaagcaggagaccaagtc
tctgaggacacagtggaaatacctctcccgaagaagctgaagacagtcacacccgttgga
accgaggaagaagttatggcagaagaaagtactgatggagaggcagaaactcaagcctat
aatcaggactctcaagattccattggagaaggagttacccagggagattatacaccaatg
gaagacagtgaagaaacatcacaatctctacaaatcgatcttggaccacttcagtcagat
caacagactacttcctctcaagatggtcaaggcaaaggagatgatgtaattgtgattgac
agtgatgatgaagatgatgatgaagaaaatgatggcgaacatgaagattatgaagaggat
gaagaagaagatgatgatgatgatgaagatgacacggggatgggagatgagggtgaagat
agtaatgaaggaactggtagtgcagatggtaatgatggatatgaagctgatgatgctgag
ggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtggagctgaaagt
aatcagagagctgctgattctcaaaacagtggtgaaggaaatacaagtgcagcagagtct
tcgttctctcaggaggtcgccagggaacagcagcccacgtcagcgtctgagagacagact
ccgcaagcaccacagtcaccaaggcgcccaccacatcctctccccccacgcctgaccatt
cacgccccacctcaggagctgggaccaccagttcagagaattcagatgacccggaggcag
tctgtagggcgtggtcttcagttgactccaggaataggtggcatgcaacaacactttttt
gatgatgaagacagaacagttccgagtaccccaactcttgtggtgccacatcgcactgat
gggtttgctgaagctattcattccccacaggttgccggtgttcctagattccggtttggg
ccacctgaagacatgccacagacaagttccagtcactctgatcttggccaacttgcttct
caaggaggtttgggaatgtatgaaacacccctttttctggctcatgaagaagagtctggt
ggccgcagcgttcccactacgcctctccaggtagcagccccagtgactgtgtttactgag
agtaccacctctgatgcttcagaacatgcctctcagtctgttcccatggtgacaacgtct
acgggcactttatccacgacaaatgaaacagcagcaggtgacgacggagatgaagtattt
gtagaggcggagtctgaaggtattagttcagaggcaggcctagaaattgatagccagcag
gaagaggagcctgtccaagcatctgatgaatcagatcttccctcaaccagccaagatccc
ccttcgagctcctccgtagataccagtagtagtcagccgaagcctttcagacgagtaaga
cttcagacaaccttgagacagggtgttcgtggtcgtcagtttaaccgacaaagaggtata
agccatgcaatgggaggaagaggaggaataaatagagggaatattaattaa
DBGET
integrated database retrieval system
