Mus caroli (Ryukyu mouse): 110289526
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Entry
110289526 CDS
T05910
Symbol
Exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110289526 (Exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110289526 (Exosc2)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110289526 (Exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110289526 (Exosc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
110289526
NCBI-ProteinID:
XP_021011427
Ensembl:
MGP_CAROLIEiJ_G0023415
UniProt:
A0A6P5PB96
LinkDB
All DBs
Position
2:27545966..27556862
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AA seq
293 aa
AA seq
DB search
MALEMRLPKARKPLSESLGRDSKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKDEDAGGFIANLEPVALSDREVISRLRNC
VVLLVTQRMMLFDTSILYCYEASLAHQIKDILKPEVMEEIMLETRQRLLDQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggagatgaggctccctaaagctcgcaaacctctcagtgagagcttgggccgc
gactctaagaaacacttggtggtgccgggggacacgatcaccacggacacaggcttcatg
cggggccatgggacatacatgggggaagaaaagctcattgcgtccgtggccggctctgtg
gagagagtgaacaaattgatctgtgtcaaagccttgaaaaccagatacaatggagaagtc
ggagacattgtagtggggagaatcacagaggttcaacagaagaggtggaaggtagagacc
aattccaggctggactccgtcttgctcctctcatccatgaaccttcctgggggagagctg
aggagaaggtctgcggaggatgagctggccatgagaggcttcttgcaggaaggcgacctc
atcagtgcggaggtccaggcggtgttctcggatggagctgtttctctgcacacaagaagc
ctgaaatatgggaagctaggtcagggagttttagtccaggtctcaccttctctggtgaaa
agacagaagactcatttccatgacttgccatgtggtgcctcagtgattctcggtaacaac
ggtttcatctggatctacccaacacctgagcacaaggatgaggatgctgggggcttcatt
gctaacttggagcccgtagctcttagtgatcgagaggtgatctcccggcttcggaactgt
gtagtcttgctggtaactcagagaatgatgctgttcgacaccagcatcctgtactgctat
gaggcctcccttgcacatcagatcaaggatatcttaaaaccggaagtaatggaggagatc
atgctggaaacacgccagaggcttttggaccaggagggatga
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integrated database retrieval system