KEGG   Mus caroli (Ryukyu mouse): 110289526
Entry
110289526         CDS       T05910                                 
Symbol
Exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110289526 (Exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110289526 (Exosc2)
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110289526 (Exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     110289526 (Exosc2)
SSDB
Motif
Pfam: S1_RRP4 KH_6 ECR1_N ECR1_N_2 RRP40_S1 EXOSC1
Other DBs
NCBI-GeneID: 110289526
NCBI-ProteinID: XP_021011427
Ensembl: MGP_CAROLIEiJ_G0023415
UniProt: A0A6P5PB96
LinkDB
Position
2:27545966..27556862
AA seq 293 aa
MALEMRLPKARKPLSESLGRDSKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKDEDAGGFIANLEPVALSDREVISRLRNC
VVLLVTQRMMLFDTSILYCYEASLAHQIKDILKPEVMEEIMLETRQRLLDQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcgttggagatgaggctccctaaagctcgcaaacctctcagtgagagcttgggccgc
gactctaagaaacacttggtggtgccgggggacacgatcaccacggacacaggcttcatg
cggggccatgggacatacatgggggaagaaaagctcattgcgtccgtggccggctctgtg
gagagagtgaacaaattgatctgtgtcaaagccttgaaaaccagatacaatggagaagtc
ggagacattgtagtggggagaatcacagaggttcaacagaagaggtggaaggtagagacc
aattccaggctggactccgtcttgctcctctcatccatgaaccttcctgggggagagctg
aggagaaggtctgcggaggatgagctggccatgagaggcttcttgcaggaaggcgacctc
atcagtgcggaggtccaggcggtgttctcggatggagctgtttctctgcacacaagaagc
ctgaaatatgggaagctaggtcagggagttttagtccaggtctcaccttctctggtgaaa
agacagaagactcatttccatgacttgccatgtggtgcctcagtgattctcggtaacaac
ggtttcatctggatctacccaacacctgagcacaaggatgaggatgctgggggcttcatt
gctaacttggagcccgtagctcttagtgatcgagaggtgatctcccggcttcggaactgt
gtagtcttgctggtaactcagagaatgatgctgttcgacaccagcatcctgtactgctat
gaggcctcccttgcacatcagatcaaggatatcttaaaaccggaagtaatggaggagatc
atgctggaaacacgccagaggcttttggaccaggagggatga

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