KEGG   Mus caroli (Ryukyu mouse): 110289733
Entry
110289733         CDS       T05910                                 
Symbol
Tubb1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04145  Phagosome
mcal04540  Gap junction
mcal04814  Motor proteins
mcal05010  Alzheimer disease
mcal05012  Parkinson disease
mcal05014  Amyotrophic lateral sclerosis
mcal05016  Huntington disease
mcal05020  Prion disease
mcal05022  Pathways of neurodegeneration - multiple diseases
mcal05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110289733 (Tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    110289733 (Tubb1)
  09142 Cell motility
   04814 Motor proteins
    110289733 (Tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110289733 (Tubb1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110289733 (Tubb1)
   05012 Parkinson disease
    110289733 (Tubb1)
   05014 Amyotrophic lateral sclerosis
    110289733 (Tubb1)
   05016 Huntington disease
    110289733 (Tubb1)
   05020 Prion disease
    110289733 (Tubb1)
   05022 Pathways of neurodegeneration - multiple diseases
    110289733 (Tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcal03036]
    110289733 (Tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcal04812]
    110289733 (Tubb1)
   04147 Exosome [BR:mcal04147]
    110289733 (Tubb1)
Chromosome and associated proteins [BR:mcal03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110289733 (Tubb1)
Cytoskeleton proteins [BR:mcal04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110289733 (Tubb1)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110289733 (Tubb1)
  Exosomal proteins of colorectal cancer cells
   110289733 (Tubb1)
  Exosomal proteins of bladder cancer cells
   110289733 (Tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 110289733
NCBI-ProteinID: XP_021011752
Ensembl: MGP_CAROLIEiJ_G0024760
UniProt: A0A6P5PC02
LinkDB
Position
2:166424762..166433648
AA seq 451 aa
MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYV
PRAVLVDLEPGTMDSIRSSRLGVLFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVMDVV
RRESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV
EPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNIM
AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPRG
LNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFGEAESDIHDLVS
EYQQFQDVRAGLEDSEEDAEEAEVEAEDKDL
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggaaattgtgcacatccagattggccagtgtggcaaccagatcggagccaagttc
tgggaggtgatcggggaagaacatgggattgactgcgctgggagctactgtgggacgtct
gctctccagctggagaggatcagcgtttactacaacgaagcctacggtaagaagtatgtg
ccgcgagccgtccttgtggacctggaacccgggacaatggacagcatccgatccagcaga
ttgggagtcctctttcagcctgacagttttgttcatggtaactctggtgctggtaacaac
tgggccaagggccactacacagagggagcggagctgatcgaaaatgtcatggatgtggta
aggagagagagcgagagctgcgactgcctacagggtttccagattgtgcattctctgggt
ggaggcaccggctcaggcatgggcaccctgctcatgaacaagatcagggaggaatacccg
gatcggatcttgaactcctttagtgtcatgccatcccccaaggtgtcagacacggtggta
gagccctacaatgccgtgctatccatccaccagctgatagagaacacagatgcctgcttc
tgcatcgacaacgaagcgctctatgacatttgtttccgcaccctgaggctgacgacaccc
acctacggggatctcaaccacctggtgtccttgaccatgagcgggatcacgacctcgctg
cgttttcccggtcagctcaatgcagacctgcgcaagctggccgtgaatatggtgcccttt
cctcgtcttcacttcttcatgcctggcttcgctccactcacagcccagggtagccagcag
taccgagccctctcagtagcggagctcacccaacagatgttcgatgcccgcaacatcatg
gctgcctgtgaccctcgccgcggccgctacctgactgtggcttgtatcttccggggtaag
atgtccaccaaggaagtggaccaacagctgctgtccattcagacaaggaacagcaactgc
tttgtggaatggattcccaacaatgtcaaggtagctgtgtgtgacatcccgccccgtggg
ctgaacatggcagctaccttcctgggcaacaatacagccatccaagagctcttcaccagg
gtctctgagcacttctcagctatgttcagaaggcgagcttttgtgcactggtacaccagt
gaagggatggacataagtgaatttggggaagctgagagtgatatccatgacctggtgtct
gagtaccaacaattccaagatgtcagagcagggctagaggacagtgaagaggatgcggag
gaggcagaggtggaggcagaagacaaagatctttag

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