Mus caroli (Ryukyu mouse): 110289759
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Entry
110289759 CDS
T05910
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine protease ATG4A-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04136
Autophagy - other
mcal04140
Autophagy - animal
mcal04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
110289759
04140 Autophagy - animal
110289759
04136 Autophagy - other
110289759
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110289759
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110289759
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110289759
Peptidases and inhibitors [BR:
mcal01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
110289759
Membrane trafficking [BR:
mcal04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
110289759
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110289759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
110289759
NCBI-ProteinID:
XP_021011788
UniProt:
A0A6P5PC25
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All DBs
Position
2:complement(8089757..8091229)
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AA seq
396 aa
AA seq
DB search
MESVMSKYENQIIIFPDYLEEFPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICSHLGRDWNSERQKEQPKEYQRILQCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCCVLPVGAADTAGDFLTASNQSKGTSVPCSAWKPLLLIVPLRLGINQINPVYVEA
FKECFKMPQSLGALGGKPNNAYYFIGFLGDEFIFLDPHTTQTFVDIEESGLVDDQTFHCL
QSPQRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHWPPFV
PPAKPEVTTTGAEFIDSTEQLEDFDLEEDFEILSXG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagttatgtccaagtatgaaaaccagattattattttccctgactacctggaa
gaattcccggatacagatgagttggtgtggattctggggaagcagcatctccttaagaca
gaaaaatctaagctgttgtctgatataagtgctcgtctatggtttacatacagaaggaaa
ttttccccgattgggggaacaggcccttcatctgatgctggatggggatgtatgctgcgc
tgtgggcagatgatgctggctcaagccctcatctgcagccacttgggaagggattggaac
tcggagagacaaaaagaacaacccaaagaataccaaaggatactgcagtgtttcctagat
agaaaagactgttgctattcaatccatcagatggcacagatgggtgtaggagaagggaaa
tcaattggcgaatggtttggaccaaacacagttgcacaggtgataaaaaaactcgcttta
tttgatgaatggaattccttggctgtttatgtctccatggataacacagtggtcattgaa
gatatcaagaaaatgtgctgtgttcttcctgtgggtgctgctgacacagctggtgatttt
ctgactgcatccaatcagagtaaaggcacctctgtcccatgctcagcctggaaacccctg
ctgctcattgtgccccttcgcctgggcataaaccaaatcaatcctgtgtatgttgaagca
ttcaaagagtgttttaagatgccacagtctttaggggctttaggaggaaagccaaataac
gcctattatttcataggattcttaggagatgagttcatttttttggaccctcacacaacc
cagacttttgttgacattgaagagagtggactagtagacgaccagacttttcattgcctg
cagtctccacagcggatgagtatcctgaacttggatccttctgtggccttgggatttttc
tgcaaagaagagaaagactttgataattggtgtagccttgttcagaaggaaattctaaag
gagaatttgaggatgtttgaattggttcagaagcacccatcacactggcctccctttgta
cctccagccaagccagaagtgacaaccacaggggcagaattcatagactctactgaacaa
ctggaggactttgacttggaggaagattttgaaattctgagtgnaggctag
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