Mus caroli (Ryukyu mouse): 110289772
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Entry
110289772 CDS
T05910
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110289772 (Rbm39)
Spliceosome [BR:
mcal03041
]
Common components
Common spliceosomal components
General mRNP proteins
110289772 (Rbm39)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
110289772
NCBI-ProteinID:
XP_021011803
Ensembl:
MGP_CAROLIEiJ_G0024554
UniProt:
A0A6P5P5V6
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All DBs
Position
2:complement(148107221..148138723)
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AA seq
530 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagccatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagagaaaaagaagcaaaagtaaagaacggaaacggagtagagat
agagaaaggaaaaagagcaaaagccgagagcggaaacgaagtagaagcaaagaaaggaga
cgaagccgctcacgcagtcgggatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcaggaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagggatgcaaggactgttttctgcatgcaactg
gcagcaagaattcgacctcgagatttggaagagtttttctctacagttggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcatatgtggaa
tttgttgatgtcagttcagtgcctctagcaattggattaactggccaacgcgttttagga
gtgccaatcatagttcaggcatcacaggcagaaaaaaatagagctgctgcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctctatgtaggctcattacactttaac
ataactgaagacatgcttcgggggatctttgaaccttttggaaggattgaaagtattcag
ctcatgatggatagtgaaactggtcgatctaagggatatggatttattacattttctgac
tccgaatgtgccaaaaaggctttggaacaacttaatggattcgagttagctgggagacca
atgaaagttggtcacgttactgaacgaactgatgcttcgagtgctagttcatttttggac
agtgatgaactagaaaggactggaattgacttgggaacaactggacgtcttcagttaatg
gcaagacttgcggagggtaccggtttgcagattccacctgccgcacaacaagcattacaa
atgagtggctctctggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagaccgaagcctcagctttagctgcagctgcgtctgttcaacct
cttgcaacacagtgtttccaactttctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtcattgaagaatgtaataaacatggaggagtc
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatct
attgctgcggctattgctgctgtcaatgcattgcatggcagatggtttgctggtaaaatg
ataacagcagcgtatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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