Mus caroli (Ryukyu mouse): 110289890
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Entry
110289890 CDS
T05910
Symbol
Pax1
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110289890 (Pax1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110289890 (Pax1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
110289890
NCBI-ProteinID:
XP_021011950
Ensembl:
MGP_CAROLIEiJ_G0024403
UniProt:
A0A6P5PAB5
LinkDB
All DBs
Position
2:139523773..139536394
Genome browser
AA seq
450 aa
AA seq
DB search
MKFTLGLGSRAWRVSWERAAAAAAAAGPGAGGALGSGSLRVSSRRGPRLARALPLCLSGG
GGARALPDCAGPSPRRSGARQLAGPRAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA
QLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQG
DPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPPQPALP
YNHIYQYPYPSPVSPTGTKMGSHPGVPGSAGHVSIPRSWPSAHSVSNILGIRTFMEQTGA
LAGSEGAAYSPKMEDWAGVNRAAFPTSPAVNGLEKPALEADIKYTQSASSLSAVGGFLPA
CAYPASNQHGVYSAPAAGYLSPGPPWPPAQAPPLAPHGAGVAVHGGELAAAMTFKHPNRE
GTDRKPPSPGSKAADALGSLHGLPIPASTS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccttgggcctggggtcgcgggcctggagagtgtcctgggagcgggcggcg
gcggcggcggctgcggcaggccctggggcgggcggcgcgctgggcagtggctcactgcgc
gtctccagccgccgcggcccacggctcgcgcgcgccctccctctatgcctctccggcggt
ggcggcgcccgagctctcccggactgcgccgggcccagcccccgccgctccggcgccagg
cagctggccggcccgcgcgcgatggagcagacgtacggcgaagtgaaccagcttggtggc
gtgttcgtcaacggccgtcccctgcccaatgccatccgcctacgcatcgtggagctagca
cagctgggtatccgaccctgtgacatcagtaggcaactgcgggtctctcatggctgcgtg
agcaaaatcctggcgcgctacaacgagaccggctccatcctgcctggggccattgggggc
agcaaacctcgagttaccacccccaatgtagtgaagcacatccgggactacaaacagggc
gatcctggcatctttgcctgggagatccgtgaccggctactggctgatggcgtttgtgac
aagtacaacgtgccctctgtgagctccatcagtcgcatcctgcgaaataagattggcagc
ctggcgcagccagggccatacgaagcaagtaagcagccgcctccgcagcctgcactgccc
tacaatcatatctaccagtacccctaccccagcccagtgtcacccacgggcactaagatg
ggcagtcatcccggggtccccggctctgcgggccacgtcagtatcccgcgttcatggccc
tccgcacattcagtcagcaacatcctgggcatccggacgtttatggagcaaacaggggcc
ctggccgggagcgaaggcgctgcctactcccccaagatggaagactgggcgggtgtgaac
cgtgcggccttccccacctcgccagcagtgaatggactcgagaaacctgccttggaggca
gacattaaatatactcagtcggcttccagcctctccgcagtgggaggcttcctgcctgcc
tgcgcctacccggcttccaaccagcacggagtgtacagcgctccagcagccggctaccta
tctcccggcccgccctggccaccagcccaggcacccccactggcgccccacggagctggt
gtggcggtgcacggcggggagcttgcagcggcgatgaccttcaaacaccccaaccgagaa
gggaccgaccggaagccccccagcccgggaagcaaggccgcggacgcactcggtagctta
cacggactgcccatcccagcctcgacctcctag
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