Mus caroli (Ryukyu mouse): 110290188
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Entry
110290188 CDS
T05910
Symbol
Sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04210
Apoptosis
mcal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110290188 (Sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110290188 (Sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110290188 (Sptan1)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110290188 (Sptan1)
Intermediate filaments
Intermediate filament-binding proteins
110290188 (Sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
110290188
NCBI-ProteinID:
XP_029330315
Ensembl:
MGP_CAROLIEiJ_G0023376
UniProt:
A0A6P7R0A2
LinkDB
All DBs
Position
2:25832656..25901930
Genome browser
AA seq
2488 aa
AA seq
DB search
MLSSFRKRRAQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQF
FQRDAEELEKWIQEKLQVASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNL
MISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDK
EAIVTSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVSQFAAKLIQEQHPEEELIKT
KQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETIGWIKEKEQLMASDDFGRDLA
SVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSASQIQVKREELITNWEQIRT
LAAERHARLDDSYRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKG
EIDAHEDSFKSADESGQALLAASHYASDEVREKLSVLSEERTALLELWELRRQQYEQCMD
LQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDE
FATKLIQNNHYAMEDVATRRDALLNRRNALHERAMHRRAQLADSFHLQQFFRDSDELKSW
VNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKEE
VAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGK
DLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEA
LKEPMVARKQKLADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQA
LQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKAKLSELNQKWEALKAKASQRRQDLED
SLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQA
LREQAQSCRQQVAPMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE
VNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIALRQGQIDNQTRITKEAGSVSLRMKQ
VEELYQSLLELGEKRKGMLEKSCKKFMLFREANELQQWINEKEAALTNEEVGADLEQVEV
LQKKFDDFQKDLKANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGAMPRDEADSKT
ASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEW
IEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAE
DLKEKCTELNQAWTSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELA
KDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERT
DLEKAWVQRRMMLDHCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHE
DFDKAINVQEEKIAALQAFADQLIAVDHYAKGDIANRRNEVLDRWRRLKAQMIEKRSKLG
ESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANA
DRIRGVIDMGNSLIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNF
NTGIKDFDFWLSEVTSGGSCSPRSGNDRLKDLNSQADSLMTSSAFDTSQVKEKRDTINGR
FQKIKSMATSRRAKLSESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKK
HKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGQEEIQQRLAQFVEHWKELKQLAAARGQR
LEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDR
VNDVCTNGQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKA
DVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIANITALKDQLLA
AKHIQSKAIEARHASLMKRWTQLLANSATRKKKLLEAQSHFRKVEDLFLTFAKKASAFNS
WFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASN
PYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWIQETR
TYLLDGIAYRRVIRVCQYEVGDDLSGRSCMVEESGTLESQLEATKRKHQEIRAMRSQLKK
IEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEA
LKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDG
HVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCVSH
MKPYVDGKGRELPTAFDYVEFTRSLFVN
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcatcgtttcgtaaacgcagagctcagaaaatggatccaagtggggtcaaagtg
ctggaaacagccgaagacatccaggagagacgacagcaggtcctggatcggtaccaccgc
ttcaaggagctctctaccttgcggcggcagaagctggaggattcctatcgcttccagttt
tttcaaagagatgctgaggagctggagaagtggattcaggagaagcttcaagttgcatct
gatgagaactacaaagatccaaccaacttgcagggaaagctgcagaagcaccaagccttt
gaagctgaagtacaggctaactcaggagccattgtgaagctggacgagacaggaaacttg
atgatttctgaagggcactttgcatctgaaaccatccggacacgtttaatggagctgcac
cggcagtgggagctgcttttggagaagatgcgggagaaaggaatcaaactgctgcaggca
cagaagctggtgcagtatttgcgggagtgtgaggatgtaatggactggatcaatgacaag
gaagcaattgtgacctctgaggagctgggccaggacctggagcatgtagaggtgctacag
aagaagtttgaagagttccagactgatctggctgctcatgaagaaagagttaatgaagtg
agccagtttgctgccaaactcatccaggagcagcacccggaagaggagctgattaagacc
aagcaggatgaggtgaatgcagcatggcagcgactgaaaggcctggctcttcaaaggcag
gggaagctgttcggtgctgctgaggtccagcgctttaacagggatgtagatgagaccatt
ggttggattaaggagaaagagcagttaatggcctctgatgacttcggcagagacttagca
agtgttcaagctttgcttcgaaagcacgagggtctggagagagatcttgctgctctagag
gacaaggtgaaagccctgtgtgctgaggctgaccgcctgcaacagtcacaccctctgagt
gccagccagatccaggtgaagcgagaggagctgattaccaactgggaacagatccgaact
ctggcagcagagagacatgcacggcttgatgactcatacaggcttcagcgctttcttgct
gacttccgtgacctcacaagctgggtaactgaaatgaaagccctcatcaatgcagatgaa
ctggccaatgatgtggctggtgctgaagccctgctggacaggcatcaagagcacaagggt
gagatcgacgctcatgaagatagctttaagtctgcagatgagtctgggcaagctctgctt
gcggctagtcactatgcctcagatgaagtgagggagaagctgagcgtcctctcagaggaa
agaactgccctgctggagctgtgggagcttcggaggcagcagtatgagcagtgcatggac
ttgcagctcttctaccgtgacactgagcaggtggacaactggatgagcaagcaggaggca
ttcctgctaaatgaagacttgggagactccttagacagtgtggaagctcttttgaagaag
catgaggactttgaaaaatctctcagtgcccaggaagaaaaaatcacagcccttgatgaa
tttgcaaccaaactcatccaaaataaccactacgcaatggaagatgtagcgactcgacga
gatgctctcctgaaccgccgaaatgcccttcatgagcgagccatgcatcgccgggcacag
ctggctgattccttccatctgcagcagttcttccgtgattctgatgagctcaaaagttgg
gtcaacgagaagatgaaaacggccaccgatgaagcttataaagatccatccaacctgcaa
gggaaagtccaaaagcatcaggcttttgaggctgagctttcagcaaaccagagccggatt
gatgccctagagaaagctgggcaaaagctaatagatgtcaaccactatgccaaggaagaa
gtagcagctcgtatgaatgaggtcatcagtttgtggaagaaacttctagaggccacagaa
ctgaaaggaataaagctccgagaagccaaccagcagcaacaatttaatcgaaatgttgaa
gacattgaattgtggctgtatgaagttgaaggtcatttggcttcagatgattatggtaaa
gacctcactaatgtccagaacctccagaagaagcatgctctgctagaggcggatgtggct
gctcaccaggatcgaattgatggcatcacaattcaggcccgccagttccaagatgctggc
cattttgatgctgaaaacattaagaagaagcaagaggcccttgtggctcgctatgaggcc
cttaaggaacccatggtggcccggaagcagaagctggcagattctcttcgtctgcagcag
ctcttccgggatgtggaggacgaagaaacctggattcgagaaaaggagcctattgctgca
tccactaacagagggaaagatcttatcggagtccagaatctgctaaagaaacaccaagct
ttgcaagcagagattgctgggcatgaacctcgcatcaaagcagtgacacaaaagggaaat
gccatggtggaggaaggccattttgctgcagaggatgtgaaggccaaactgagtgagctc
aaccagaagtgggaggctctgaaagccaaagcctcccagcggaggcaggatctagaggac
tcgctgcaggcccagcagtactttgccgatgccaatgaggctgagtcctggatgcgggag
aaggagcccattgtgggcagtacggactatgggaaggatgaagactctgctgaggctcta
ctaaagaagcatgaagctttgatgtccgatctcagcgcctacggcagcagcatccaggct
ctgcgagagcaggcccagtcatgccggcaacaagtggcccccatggatgatgagactggg
aaggagctagtcttggctctctatgactatcaagagaagagtcctcgtgaggtcaccatg
aagaaaggggatatcctcaccttgctcaacagcacaaacaaggattggtggaaagtggaa
gtgaatgaccggcagggtttcgtgccagctgcatatgtgaagaagctggaccccgcccag
tcagcctcgagggagaacctcctggaagagcagggcagcattgctctgcggcaggggcaa
attgacaaccagacacgcataactaaggaggccggcagtgtatctctgcgtatgaaacag
gtggaagaactatatcagtctctgctggaactgggtgagaagagaaaaggcatgttggag
aagagttgcaagaagttcatgttgttccgggaagcaaacgagttacagcagtggatcaat
gagaaggaggctgctctaacgaatgaggaggttggcgctgacttggagcaggttgaggtg
ctgcagaagaagtttgatgacttccagaaggacctgaaagccaatgagtctcggctgaag
gacattaacaaagtagcggaagacctggagtctgaaggtctgatggcagaggaagtgcag
gctgtgcagcagcaggaggtgtatggtgcgatgcccagggatgaagcagattccaagaca
gcctccccatggaagtctgctcgactgatggtccacacagtggctaccttcaactccatc
aaggagctgaatgagcgttggcggtccctgcaacagctggctgaggaacgtagccagctc
ttgggcagtgcacacgaagtacagaggtttcacagagatgctgatgaaaccaaagaatgg
atcgaagagaagaatcaggctctgaacacagacaactatggccatgatttagctagtgtc
caggcccttcagcgcaaacatgaaggctttgagagggaccttgcagctcttggtgacaag
gtgaattcccttggagaaacagcccaaaggctgatccagtcccaccctgaatctgcagag
gacttaaaggaaaagtgcacagagttaaaccaggcctggaccagcctagggaagcgtgca
gaccagcgcaaggccaaattgggtgactcccatgatctgcagcgcttccttagcgatttc
cgggacctcatgtcttggatcaatggaatacgagggttggtatcttcagatgaactagcc
aaggacgtcactggagctgaggctttgctggagcgacaccaggaacaccggacagaaatt
gatgccagggctggcactttccaggcatttgagcagtttgggcagcagctgttagctcac
gggcactatgccagcccggagatcaaagagaaacttgatattcttgaccaggagcgcaca
gacctggagaaggcctgggtccagcgcaggatgatgctggaccactgcctggagttgcag
ctgttccatcgggactgtgaacaagcagaaaactggatggctgcccgggaggccttccta
aacacagaagacaaaggagactcgctggacagcgtggaggcactgatcaaaaaacatgaa
gactttgacaaagctatcaatgtccaggaggaaaagatagctgccctgcaggcctttgcc
gaccagctcattgccgttgaccactatgccaagggagacattgcaaaccgacgcaatgag
gtccttgaccggtggcgccgcctaaaagcccagatgattgagaaaaggtcaaaactggga
gaatctcaaacacttcagcagttcagccgggatgtggatgagattgaagcctggatcagt
gagaagttacagacagccagcgatgagtcatacaaggaccccaccaacatccagctttcc
aagctgttgagcaagcaccagaagcaccaagcctttgaggcagaactgcacgccaatgct
gaccgaatccgtggagttattgacatgggcaactccctcattgagcgtggggcctgtgct
ggcagtgaggatgctgtcaaggcccgcctggctgcccttgcagaccagtggcagttcctg
gtgcagaagtcagctgagaagagccagaagctaaaagaggcaaataagcagcagaacttc
aacactgggatcaaagactttgacttctggctctctgaggtaacgtcaggtggttcttgc
tccccacgatcagggaatgatcgcctgaaggacctgaacagccaggctgacagcctgatg
actagcagtgccttcgacacctcccaagtgaaagagaagcgggacaccatcaatggacgc
ttccagaagatcaagagcatggccacctcccgaagagcgaaactgagcgagtcccaccgc
ctgcaccagttcttccgggacatggatgacgaggagtcctggatcaaggagaagaagttg
ttagtgagctctgaggactatggcagagacctcactggtgttcagaatctgaggaagaaa
cacaagcggctagaagctgaactggctgcacatgaaccggccattcagggtgtcctggac
actgggaagaagctgtctgatgacaacaccatcgggcaggaggagatccagcaacggctt
gcacagtttgtggagcactggaaggagctaaagcagctggcagctgcgcggggccagcgg
ctagaggagtccttggagtatcagcagtttgtagccaatgtggaagaggaggaggcttgg
atcaatgagaagatgactctggtggccagcgaagactatggagacactcttgctgccatc
cagggcttactgaagaaacacgaagcttttgagacagacttcactgtccacaaggatcgg
gtgaatgatgtctgtactaatggacaagacctcattaaaaagaacaatcaccatgaagag
aacatctcttcaaagatgaagggtctgaatggaaaggtgtctgatctggagaaagcagca
gctcagaggaaagcaaagctggatgagaactcagccttccttcagttcaactggaaggct
gacgtggtagagtcctggattggtgaaaaggagaacagcttgaaaacagatgactatggc
cgagatctgtcttctgtccaaactctgctcacaaaacaggagacatttgatgctggcctg
caggccttccagcaggagggtattgccaatatcactgccctcaaagaccagctgctagct
gccaagcacattcagtctaaggccatcgaggcccgacatgcctccctcatgaagagatgg
acccagctgttggccaattcagctacccggaagaagaagttgctggaggcccagagtcat
ttccgtaaggtagaagacctcttcctgacctttgccaaaaaggcatcggctttcaatagc
tggtttgagaatgcagaagaagacctcacagacccagtgcgctgcaactctctggaagaa
atcaaagcccttcgagaggctcacgatgccttccgctcatccctcagctctgcacaggcc
gacttcaaccagctagccgagctggaccgccagatcaagagtttccgggtggcctccaac
ccctacacctggttcacaatggaggccctggaagagacctggagaaacctccagaagatc
attaaggaacgagaactggagctgcagaaggagcagcggcggcaggaggagaatgacaag
ctgcgccaagaatttgcccagcatgccaacgccttccaccagtggatccaggaaacaaga
acgtatctcctcgacggcatagcatatcgtcgggtcattcgtgtctgtcagtatgaagtt
ggggatgatctgtctggaaggtcctgcatggtcgaagagtcgggaactctggaatctcag
cttgaagctaccaaacgcaagcaccaggagattcgagccatgagaagtcagctgaagaag
atcgaggacctgggggctgccatggaggaagccctcatcctggacaacaagtacacggag
cacagcactgtgggcctggcccagcagtgggaccagttagaccagctgggcatgcgcatg
cagcacaacctggagcagcagatccaggccaggaacacaacaggagtgactgaggaggcc
ctcaaggaattcagcatgatgttcaaacacttcgacaaggacaagtctggccggctgaac
catcaggagttcaaatcctgtcttcgttccctgggctatgatctgccaatggttgaggaa
ggagagcctgatcctgagtttgaggcaattctggacactgttgatcccaacagggatggc
catgtctccctgcaagaatacatggctttcatgatcagccgcgaaacggagaatgtcaag
tccagtgaagagatcgagagcgctttccgggccctcagctctgagggcaagccttatgtg
accaaggaggagctctaccagaacctgacccgtgaacaagctgactattgtgtctcccac
atgaagccctatgtggatggcaagggccgagaacttccaactgccttcgactacgtcgag
ttcacccgctcactctttgtgaattga
DBGET
integrated database retrieval system
