Mus caroli (Ryukyu mouse): 110290333
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Entry
110290333 CDS
T05910
Symbol
Ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
110290333 (Ttf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110290333 (Ttf1)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
110290333 (Ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110290333
NCBI-ProteinID:
XP_021012516
Ensembl:
MGP_CAROLIEiJ_G0023363
UniProt:
A0A6P5P7F0
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Position
2:24931543..24958815
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AA seq
859 aa
AA seq
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MKGGTRKFKTHTETLYKKKKWSSVSEKRPQKCPSQCLESKQPQVSVLGKRKRESQTPAQE
NLESEWPQKAKRKKRRRESQTPAQENLESEWPQKAKKKKRREEPQTPAQENLESEQPPVS
LLGKRRRESQTPAQENSESEQPRKAKRRKKKKKESQQPTSSLLKNPETFRKAKKTTSAHR
KKKNSVLEVDMETGIILVDKENMENLLETSRKDVDIVYVDMSKGQRSAKVCETEELPTAK
PQEHGCRELLGDVRSRKKQKHPQKVAPWDVVQGSQPESISLSPSEPLSSEDLEGKSKEAA
VFCKTKSKKKVLRNQELEPVPDSLDNSETISERLDSTHHEGVVGAGEECESTKESHSIKK
KSKKKKHKSVALATSSDSASVPDSKAKSALVDSPEGSGSVREEDMDHRPAEAEAQACSTE
KHREAMQRLEPTHEEESNLESASNSATRHISEDRRDSDDSDVDLGSAVRQLREFIPDIQE
RAATTIRRMYRDDLGRFKEFKAQGVAIRFGKFSAKENKQIEKNVQDFLSLTGIESADKLL
YTDRYPEEKTQITNLKRKHAFRLHIGKGIARPWKLVYYRAKKIFDVNNYKGRYNEEDTKK
LKAYHSLHGNDWKKIGAMVARSSLSVALKFSQIGGTRNQGAWSKAETQRLIKAVEDVILK
KMSPQELRELDSKLQEDPEGRLSIVREKLYKGISWVEVEARVETRNWMQCKSKWTEILTK
RMTHGGFVYRGVNALQAKITLIERLYELNVNDANEIDWEDLASAIGDVPPPFVQAKFYKL
KAACVPFWQKKTFPEIIDYLYKNSLPLLKEKLDKKMKKKDGQIQTPAAPKQDFLFQDIFH
CDDDSDEGSPEEPSASDVQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggggcacaagaaaatttaagacccacactgaaactttgtacaagaaaaagaaa
tggtcttctgtgtctgaaaaaagacctcagaaatgtccctctcaatgcttggagagcaag
cagcctcaggtatctgtgttggggaagaggaagagggagtcccagacaccagcccaggag
aacttagagagtgagtggcctcaaaaggccaagaggaagaagagaaggagggagtcccag
acacccgcccaggagaacttagagagtgagtggcctcaaaaggccaagaagaagaagaga
agggaggaaccccagacaccagcccaagagaatttggagagtgagcagcctccagtgtcc
ttgctggggaagagaaggagggaatcccagacaccagcccaggagaactcggagagtgag
caacctcggaaagccaagagaaggaagaagaaaaagaaagagtcccagcagccaacttcc
tcccttctgaaaaatccagaaacctttcgtaaagctaaaaaaaccacttctgcccacaga
aagaaaaagaatagtgttctggaggtggatatggaaactgggatcatccttgtagataaa
gaaaacatggagaacctgctagagacttctagaaaggatgtggatattgtttatgttgat
atgagcaagggacaaaggtcagcaaaagtgtgtgaaacagaagagctgcccactgctaag
ccacaggaacatggctgtcgagagctgcttggtgacgtcaggagcagaaagaaacagaag
cacccccagaaagttgcaccctgggatgttgttcaggggagccagcctgagagtatctcc
ctgtccccatcagagcccttgtcttctgaagatttagaaggcaaaagcaaagaagcagca
gtgttttgcaaaacgaagtctaaaaaaaaagtgctcaggaaccaggaattggagcccgtc
cctgacagtcttgataactcggagaccatctctgagagacttgatagcacacaccacgaa
ggagttgttggggctggagaagaatgtgagagcaccaaagaatcccacagtatcaaaaaa
aagtccaagaaaaagaagcacaagtctgttgctcttgccacatctagtgacagtgcctca
gtgccagacagcaaggctaagagtgccctggtggactccccagaaggcagtggttctgtg
agggaagaggacatggaccacaggccagcagaggcagaagcccaggcttgttccactgag
aagcacagggaagcgatgcagaggttagaacctacccatgaagaagaaagcaatttggaa
tcagctagcaattctgcaacaagacacatatctgaggacaggagagattctgatgactcg
gatgttgatttgggctctgcagtgaggcagctgcgagagttcattcctgacatacaggaa
agggcggccaccaccatcagacgaatgtatcgggatgacctagggcgcttcaaagaattt
aaggcacaaggtgtggctattagatttggcaaattttctgctaaagaaaataaacaaata
gaaaaaaatgtgcaagatttcctatccctgactggaattgagagtgcagacaagctgctg
tacactgacagatacccagaggaaaagactcagatcaccaacctaaaacggaagcatgcc
ttcagactgcacattgggaagggcatcgctcggccctggaagctcgtgtactaccgtgca
aagaagatctttgatgtgaataactacaaaggcaggtacaatgaagaagatactaagaag
ctgaaggcataccattccctccatggaaacgactggaaaaagattggggccatggtggcc
cgaagcagcctctcggtcgccctcaagttctctcagattggtggtactagaaaccaaggt
gcttggagtaaggcagaaacccagagactaatcaaggctgtggaggacgtgatcctaaag
aagatgtctccccaggagttaagagaactggattctaaactccaggaagaccctgagggt
cgcctgtcaattgtccgggaaaaactctacaagggcatatcatgggtggaggtggaagct
agagtggagacccggaactggatgcagtgcaaaagtaagtggacagagattcttaccaaa
aggatgacccatggtgggttcgtgtatcgtggggtcaatgctctacaggccaaaatcacc
cttattgaaaggttgtatgaactaaatgtgaatgatgctaatgaaatagactgggaagat
cttgctagcgccataggggatgtccctccaccttttgttcaggcaaaattttataagctg
aaagctgcctgcgttcccttttggcagaaaaagacttttccagaaatcattgactactta
tataagaacagtctgcctttgctgaaggaaaagttagacaagaaaatgaagaaaaaagac
ggccagatccaaacacccgcagctcccaaacaagacttcctgttccaagacatcttccat
tgcgatgatgacagtgatgaagggagcccagaggagcccagcgcctctgatgtgcagtga
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