Mus caroli (Ryukyu mouse): 110290716
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Entry
110290716 CDS
T05910
Symbol
Prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110290716 (Prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110290716 (Prpf3)
Spliceosome [BR:
mcal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110290716 (Prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
110290716
NCBI-ProteinID:
XP_021013024
Ensembl:
MGP_CAROLIEiJ_G0025354
UniProt:
A0A6P7R0E8
LinkDB
All DBs
Position
3:complement(89910702..89936061)
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AA seq
683 aa
AA seq
DB search
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPAPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEVELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLTPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctaagcgggagctggatgagctgaagccatggatagagaagacggtgaag
agagtactgggcttctcagagcccacggtggtcactgcagccttgaactgtgtggggaag
ggcatggacaaaaagaaggcggctgatcacctgaaaccttttcttgatgattccactctc
cgatttgtggataagctgtttgaggctgtggaggaaggacgaagctcaaggcattccaag
tctagcagtgacagaagcagaaagcgagagttaaaggaggtgtttggtgatgactctgag
atctcaaaggaatcatccggggtaaagaagcggcggataccccgttttgaggaggtagaa
gaggagccagaggtgatccctggacctccatcagaaagccctggcatgctaacgaagctc
cagatcaaacagatgatggaggcagcaacacgacaaattgaggaacggaaaaaacagctg
agcttcatcagcccccctgcacctcagccaaagacaccttcttcttcccaaccagagcga
cttcccatcggcaacactattcagccctcccaggccgctacctttatgaacgatgccatt
gagaaagcgaggaaagctgccgagctgcaagcccgaatccaggcccagctggcgttgaag
ccagggcttattggcaatgccaacatggtgggcctagctaatctccatgccatgggcata
gctccaccgaaagtagagttgaaagaccagactaagcctaccccactgatcctggacgag
caaggccgcactgtggatgccacgggcaaggaggtggagctcacacatcgcatgcccacc
ctgaaggcaaacattcgggctgtgaagcgggaacagttcaagcagcagctaaaagaaaag
ccatcagaagacatggagtctaataccttttttgatccccgagtctcaattgccccttcc
cagcgccaaagacgcacttttaaattccatgacaagggcaaatttgagaagattgctcaa
cgattacggacaaaggcgcaactggagaagctgcaagcagagatttcacaggctgctaga
aaaacaggcattcatacttcaactagacttgccctcattgctcccaaaaaggagctaaag
gaaggcgatatcccggagattgagtggtgggactcgtacatcatacccaacggctttgac
cttacagaggaaaatcccaagagagaagactattttggaatcacaaatcttgttgaacat
ccagcccagcttaatcctccagttgacaatgatacaccagttacccttggggtatatctt
acgaagaaggagcagaagaaacttcggaggcaaacaagaagggaagcacagaaagagcta
caagagaaagtcaggctaggcctgacgcctcctccagaacccaaagtgagaatctcaaat
ttaatgcgagtattaggaacagaagcagttcaagaccctacaaaggtagaagcccatgtc
agagctcagatggcaaagagacagaaagcgcatgaagaggccaatgcggcccgaaaactt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtgcacatatctgtgtatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcagctgtacctgacaggggtggtggtgctgcacaaagatgtcaac
gtggtggtagtggaagggggccccaaagcccagaagaaatttaagcgtctcatgctacat
cggataaagtgggatgagcagacatctaacacgaagggagatgatgatgaggaatctgat
gaagaagctgtgaagaaaactaacaaatgtgtactagtatgggagggtacagccaaagac
cggagctttggagaaatgaagtttaaacagtgccctacagagaacatggctcgtgagcat
ttcaaaaagcatggggctgaacactactgggaccttgcactgagtgaatctgtgttggag
tccaccgactga
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