Mus caroli (Ryukyu mouse): 110290719
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Entry
110290719 CDS
T05910
Symbol
Fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110290719 (Fxr1)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110290719 (Fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
110290719 (Fxr1)
mRNA cycle factors
Stress granule specific factors
110290719 (Fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
110290719
NCBI-ProteinID:
XP_021013030
Ensembl:
MGP_CAROLIEiJ_G0024927
UniProt:
A0A6P5PIH0
LinkDB
All DBs
Position
3:28948527..28999171
Genome browser
AA seq
677 aa
AA seq
DB search
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEREKGYATDESTVSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRETRHQRDSRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSEKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEIPKLPRTLGEEKTK
TLKEDSTQEAAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgcggctccaacggggctttctacaagggatttatc
aaagatgtccacgaagactccctcacagttgtttttgaaaataattggcaaccagaacgc
caggttccgtttaatgaagtacgattaccaccaccacctgatataaaaaaagaaattagt
gaaggagacgaagtagaggtatattcaagagcaaatgaccaagagccatgtggatggtgg
ctggctaaagttcggatgatgaaaggagagttttatgtcattgaatatgctgcttgtgat
gccacttacaacgaaatagtcacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaagtgcacagtggatgttcctgaggacctgagagaagcg
tgtgctaatgaaaatgcccataaagattttaagaaagcagtaggagcatgcagaatcttt
tatcatcctgaaactacccagctaatgatactgtcggccagtgaagcgactgtgaagaga
gtaaatatcttaagtgatatgcatttgagaagtattcggacgaagttgatgcttatgtcc
agaaatgaagaggccactaagcatttagaatgcacaaaacaacttgcagcagcttttcat
gaagaatttgttgtgagagaagatttaatgggcctggcaataggaacacatggtagtaac
atacagcaagctaggaaggttcctggagtaactgccattgagttagatgaagacaccgga
acgtttagaatctatggagagagtgctgaggctgtaaaaaaagctagaggtttcttggaa
tttgtggaagattttattcaagttcccaggaatcttgttggaaaagtaattggaaaaaat
ggcaaagttattcaagaaatagtggataaatctggtgtggttcgagtaagaattgaagga
gacaatgaaaataaactacctagagaagacggaatggttccatttgtatttgttggcact
aaagaaagcattgggaatgtgcaagttcttctagagtatcacatcgcttacttaaaggaa
gtggaacaactaagaatggagcgcctacagattgatgagcagctgcggcagattggtatg
ggtttcagaccttcttccaccagagggcctgaaagagagaaaggatatgccactgatgaa
agtaccgtctcttctgtacaaggttctaggtcttatagtggaagaggcagaggtcgtcgg
ggccctaattacacctccggttatggtacaaattctgagctgtctaacccctccgaaaca
gaatctgagcgtaaagatgagctgagtgattggtcattggcaggagaagatgatcgagag
actcgacatcagcgagacagcaggagacgcccaggaggaagaggcagaagtgtttctggg
ggacgaggtcgcggtggaccacgtggtggcaaatcctccatcagttctgtgctcaaagat
ccagacagcaatccatacagcttacttgataatacagaatcagatcagactgcagacact
gacgccagcgaatctcaccacagtactaaccgtcgtaggcggtctcgtagacggaggact
gatgaagatgctgttctgatggatggaatgactgaatctgatacagcctcagttaatgaa
aatgggctagatgatagtgaaaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgt
ttcaggggtcaggcagaagatagacagccagtcacagttgcagattatatttctagagct
gagtctcagagcagacaaagaaacctcccaagggaaactttggctaaaaacaagaaagaa
atggcaaaagatgtgattgaagagcatggtccttcagaaaaggcaataaatggtccaact
agcgcttctggcgatgaaattcctaagctaccgcgtactctgggagaagaaaagactaag
accttaaaagaagacagcactcaagaagcagcagtcctgaatggtgtctcataa
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