Mus caroli (Ryukyu mouse): 110290808
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Entry
110290808 CDS
T05910
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110290808 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110290808 (Snx27)
Membrane trafficking [BR:
mcal04131
]
Protein recycling
Others
Others
110290808 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110290808 (Snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
UBX
RBD
RA_3
SNX17-31_F2_FERM
DarA_N
Ras_bdg_2
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
110290808
NCBI-ProteinID:
XP_021013248
Ensembl:
MGP_CAROLIEiJ_G0025315
UniProt:
A0A6P5PIY4
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All DBs
Position
3:complement(88675597..88756173)
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AA seq
539 aa
AA seq
DB search
MADEDGEGIHPSAPHRNGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR
AGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVV
YNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEY
LEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQ
AIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLF
TTEEEVLLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCE
GYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVAT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggacggggaagggattcacccctcagccccgcaccggaatggaggcggc
ggcggggggtctgggctccactgcgccgggaacggtggcgggggaggcggcggcccgcgg
gtcgtgcgcattgtcaagtccgaatccggctacggcttcaacgtgcggggccaagtgagc
gagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcatgtgagc
gccgtgctgcccgggggggcggccgaccgggccggggtgcgcaaaggggaccgcatcctg
gaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggacctgatccga
gcaggcgagaaggaattgatcttgacagtgttgtctgtacctcctcatgaggctgataac
ctagatcccagtgacgactccttgggacaatcattttatgattacacagaaaagcaagca
gtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaagtttgtggta
tacaatgtttacatggctgggaggcagctgtgttctaagcggtaccgggagtttgccata
ctgcaccaaaacctgaagagagaatttgccaactttacatttcctcgacttccaggaaag
tggccattctcattatcagaacaacagttggatgcccggcgtcgcggcttggaagaatat
ctagaaaaggtgtgttcaatccgagtcattggtgagagtgacatcatgcaggaattcctg
tctgagtctgatgagaattacaatggtgtgtctgatgtagaactgagagtagcactaccg
gatggaacaacggttactgtcagagttaaaaagaacagtactacagaccaagtgtaccag
gctattgcagcaaaggttggcatggacagtacaacagtgaattactttgccttatttgaa
gtgatcaatcattcctttgtacgtaaactggcacctaacgaatttcctcataaactctac
gtccagaactatacatcagctgtgccaggcacttgcctgaccattcgcaagtggctcttt
acaacagaagaagaagtcctcttaaatgacaatgaccttgctgttacgtacttctttcat
caggctgttgatgatgtaaagaaaggttacattaaagcagaagagaagtcttaccagtta
cagaagctgtatgaacaaaggaagatggtcatgtacctcaacatgctaaggacctgcgag
ggctacaatgaaatcatcttccctcactgtgcctgtgactccaggaggaaggggcatgtt
atcacagccatcagcatcacgcactttaaacttcatgcatgcactgaagaagggcagctg
gagaaccaggtaatagcgtttgaatgggatgagatgcagcgatgggacacagatgaagaa
ggaatggccttctgttttgaatatgctcgaggagagaagaagcctcgatgggttaaaatc
ttcacaccatatttcaattacatgcatgaatgctttgagagggtgttctgcgagctcaag
tggagaaaagagaatattttccagatggcgaggtcacagcagagggatgtggccacctag
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integrated database retrieval system
