Mus caroli (Ryukyu mouse): 110290822
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Entry
110290822 CDS
T05910
Symbol
Rorc
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04659
Th17 cell differentiation
mcal04710
Circadian rhythm
mcal05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
110290822 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
110290822 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
110290822 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110290822 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcal03310
]
110290822 (Rorc)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110290822 (Rorc)
Nuclear receptors [BR:
mcal03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110290822 (Rorc)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Emfourin
Motif
Other DBs
NCBI-GeneID:
110290822
NCBI-ProteinID:
XP_021013276
Ensembl:
MGP_CAROLIEiJ_G0025308
UniProt:
A0A6P5PEZ9
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Position
3:88544737..88572353
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AA seq
516 aa
AA seq
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MDRAPQRHHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQQQQEQVAKTPPAGSRGADTLTYTLGLSDGQLPLGASPDLPEASACPPGLLRASGS
GPPYSNTLAKTEVQGASCHLEYSPERGKAEGRDSIYSTDGQLTLGRCGLRFEETRHPELG
EPEQGPDSHCSPSFCSAPEAPYASLTDIEYLVQNVCKSFRETCQLRLEDLLRQRTNLFSR
EEVISYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLKAGAMEVVL
VRMCRAYNANNHTVFFEGKYGGVELFRALGCSELISSIFDFSHFLSALCFSEDEIALYTA
LVLINANRPGLQEKRRVEHLQYNLELAFHHHLCKTHRQGLLAKLPPKGKLRSLCSQHVEK
LQIFQHLHPIVVQAAFPPLYKELFSTDVESPEGLSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccggacatctcgggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaaaatctgtggggacaagtcatctggg
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccgcagccagcag
tgtaatgtggcctactcctgcacgcgtcagcagaactgccccattgaccgaaccagccgc
aaccgatgccagcattgccgcctgcagaagtgcctggctctgggcatgtcccgagatgct
gtcaagtttggccgaatgtccaagaagcagagggacagtctacatgcagaagtgcagaaa
caactgcaacagcagcagcaacaggaacaagtggccaagactcctccagctgggagccgt
ggagcagacacacttacatacactttagggctctcagatgggcagctaccactgggtgcc
tcacctgacctacctgaggcctctgcttgtccccctggcctcctgagagcctcaggctct
ggcccaccatattccaataccttggccaaaacagaggtccagggggcctcctgccacctt
gagtatagtccagaacgaggcaaagctgaaggcagagacagcatctatagcactgacggc
caacttactcttggaagatgtggacttcgttttgaggaaaccaggcatcctgaacttggg
gaaccagaacagggtccagacagccactgcagtcccagtttctgcagtgccccagaggca
ccatatgcttctctgacagacatagagtacctggtacagaatgtctgcaagtccttccga
gagacatgccagctgcgactggaggaccttctacggcagcgcaccaacctcttctcacgg
gaggaggtgatcagctaccagaggaagtcaatgtgggagatgtgggagcgctgtgcccac
cacctcactgaggccattcagtatgtggtggagtttgccaagcggctttcaggcttcatg
gagctctgccagaatgaccagatcatactactgaaagcaggagcaatggaagtcgtccta
gtcagaatgtgcagggcctacaacgccaacaaccacacagtcttttttgaaggcaaatac
ggtggtgtggagctgtttcgagccttgggctgcagtgagctcatcagctccatattcgac
ttttcccacttcctcagcgccctgtgtttttctgaggatgagattgccctctacacggcc
ctggttctcatcaatgccaaccgtcctgggctccaagagaagaggagagtagagcatctg
caatacaatttggagctggctttccatcatcatctctgcaagactcatcgacaaggcctc
ctagccaagctgccacccaaagggaaactccggagcctgtgcagccaacatgtggaaaag
ctgcagatcttccagcacctccaccccatcgtggtccaagccgccttccctccactctat
aaggaactcttcagcactgatgtcgaatcccccgaggggctgtcaaagtga
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