KEGG   Mus caroli (Ryukyu mouse): 110290850
Entry
110290850         CDS       T05910                                 
Symbol
Hltf
Name
(RefSeq) helicase-like transcription factor isoform X2
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110290850 (Hltf)
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110290850 (Hltf)
Enzymes [BR:mcal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110290850 (Hltf)
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110290850 (Hltf)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    110290850 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 DEAD ResIII zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_5 zf-ANAPC11 zf-C3HC4_4 HDA2-3 zf-rbx1 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 110290850
NCBI-ProteinID: XP_021013349
Ensembl: MGP_CAROLIEiJ_G0024878
UniProt: A0A6P5PJ95
LinkDB
Position
3:15241254..15300109
AA seq 1003 aa
MSYTFTRGPVWKYSQSVQYGSHENIPRLSYSTFLPHFEFQDIIPPDDFLTSEEEQDLVLF
GTMRGQVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHIKREIAAAVA
YIMDNKLAQVEGVVPFGSSNTFTMPLHMTFWGKEENRNVVLEQLKKHGLKLGPTPKTLGS
SLENAWGSGRAGPSYSRPAHVAVQMTTDQLKTEFDKLFEDLKEDDRTVEMEPAEAIETPL
LPHQKQALAWMIARENSKELPPFWEQRNDLYYNTITNFSVKERPENVHGGILADDMGLGK
TLTAIAVILTNFDDGRPLLSKRGKKNHPGKEYKDETIKLRGSNTDKKEDGHSESSTCGEE
RSISGTPEKSSCPLSQLSSVGPKRRKVSVQYIESSDSEEIETSELPQKMKGKLKNAQLNT
KSRVKGSSKVKEDSKFALTVFASATQRKMLKKGTSMMECSETCDSGERTRTTLIICPLSV
LSNWIDQFGQHVKSEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNILTHDYGTKDDSPL
HSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKLK
PFIDREWWYRIIQRPVTSGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQ
HITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTNGM
SSSGPSRSDTPEELRKMLIEKMKIILSSGSDEECAICLDSLTFPVITHCAHVFCKPCICQ
VIQSEQPHAKCPLCRNEIHGDNLLECPPEELACDSDKESSMEWTSSSKINALMHALIELR
TKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPT
IMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSV
EENMLKIQNTKRDLAAGAFGTKKTDANEMKQAKINEIRTLIDL
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgtcctatacgttcacgaggggtcctgtttggaagtattcacagtctgtccagtatgga
tcacacgaaaatattccaagactttcatactcaactttcttgccacattttgaattccaa
gacattattcctccagatgacttcctaacgagtgaggaagagcaagatttggttttattt
ggaactatgagaggacaagttgttgggctacgctattacacaggagttgtaaataataat
gaaatggttgctttacaacgagagcctaataatccctatgataagaatgctataaaagta
aataatgtgaatggaaatcaggttggccatataaagagagagattgcagctgccgtggcc
tatatcatggacaacaaattggcacaagtggaaggtgtagttccttttggttcaagtaat
acttttaccatgcctcttcatatgactttctggggaaaagaagaaaatagaaacgtggtt
ttagagcagttgaagaaacatggacttaagttgggtcccacaccaaagactttagggtcg
agtttggagaacgcatggggctctgggagagctggaccaagctatagtaggccggctcat
gtggcagtacagatgacaactgaccagctcaaaacggaatttgacaaattatttgaagat
ttaaaagaagatgatagaactgttgaaatggaaccagctgaggctattgaaacaccgttg
cttccacaccaaaaacaagctctagcttggatgatcgcacgagagaacagcaaagaactg
ccaccattctgggaacagcgcaatgacttatattacaatacaataacaaatttttctgtg
aaggaacggccggaaaatgttcatggaggaattctagcggatgatatgggtttgggcaaa
actcttactgctattgctgtcattcttaccaactttgatgatggcaggcctcttctcagt
aagagaggcaagaagaatcatccaggaaaggaatacaaggatgagaccattaagctcaga
ggaagtaatacggacaagaaggaagatggacactcagagtcatccacgtgtggtgaggaa
cgcagtatttcaggtactcccgagaagagtagctgtcctctgtcacaactgtccagtgtc
ggccctaagagaagaaaagtttctgtacagtacattgaaagtagtgattcagaggaaatc
gagacaagcgaactgccccagaaaatgaaaggcaagctgaaaaatgcacagttaaatact
aaaagtagagtaaaaggatcatctaaggttaaagaagattcaaaatttgcacttactgtt
tttgcctctgcaacacaaaggaaaatgttgaaaaaaggcacgtctatgatggagtgctca
gagacatgtgacagtggagagaggacaagaacaacactgatcatctgtccactctctgtg
ctcagcaactggattgaccagtttggacaacatgtaaaatcagaagtgcacttgaatttt
tatgtttattatggtcctgatcgtattagagattcagcctggctttcaaaacaggatatt
attttgactacttacaatattttaactcatgattatggaactaaagatgatagtccattg
catagcatcaagtggttaagggtgatcctggatgaaggccatgccattcgaaatccaaac
gctcagcagacaaaagctgtacttgagttagaagcagaaagaagatgggtattgacaggt
actcctatccagaattctttaaaggacttgtggtctcttctgtccttcttaaaacttaag
ccattcattgatagagagtggtggtataggatcatacagcgtcctgtcacttcaggagat
gagggaggacttaggcgtttacagtccttaataaaaaatatcacgcttagaagaacaaag
acaagcaaaattaaagggaaacctgttttggagttgccagaaaggaaagtatttattcag
cacattactctgtcagaagaagagagaaagatttatcagtctgttaaaaatgaaggcaaa
gctgccattggaaggtattttactgaagggactgtccttgcacactatgcagatgtcttg
ggtcttctgcttagattgcggcagatttgttgccatacccatcttcttacaaacggaatg
tcttcaagtggcccctccagaagtgacacgcctgaagagctgagaaagatgttaatagag
aagatgaagataattctgagctctggttcagatgaggaatgtgcaatctgcctggattcc
ttaacatttcctgtgataacccattgtgcacacgtgttctgtaaaccttgtatctgtcag
gtcattcagagtgagcagccacatgcaaagtgtcctttgtgcagaaatgagatacatgga
gataatctattagaatgtcctccagaagaactggcatgtgacagtgacaaagagtccagt
atggaatggacgtccagctcaaagattaatgctctaatgcatgctttgattgaattacgg
acaaaggaccccaacataaaaagtttagttgtttctcagtttaccacattcttgtcttta
atagaaacacctcttaaagcctcaggatttgtgtttactcgcttagatggttccatggct
caaaagaaaagagttgaatcaattcagcgttttcaaaacacagaagcaggatctccgacg
ataatgctgctgtccttaaaagcaggtggagttggcttgaatctctgcgcagcttctcga
gtgttcttaatggatccggcctggaatcctgctgcagaagatcagtgctttgaccggtgc
catcgacttggccagaagcaagaggtgatcatcacaaaattcattgtgaaggactctgtt
gaagaaaatatgttgaaaatacagaacacgaagcgagacctggcagctggagcctttggc
actaagaaaacagacgccaatgaaatgaaacaagctaaaatcaatgaaatcagaacttta
attgacttataa

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