Mus caroli (Ryukyu mouse): 110290956
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Entry
110290956 CDS
T05910
Symbol
Ptbp2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110290956 (Ptbp2)
Spliceosome [BR:
mcal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110290956 (Ptbp2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
110290956
NCBI-ProteinID:
XP_021013550
Ensembl:
MGP_CAROLIEiJ_G0025581
UniProt:
A0A6P5PJW2
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All DBs
Position
3:complement(113315830..113381009)
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AA seq
537 aa
AA seq
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MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSGVVVTANGNDSKKFKGEDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattgtcactgaggttgctgttggtgtgaagagaggatctgacgagctactc
tcaggcagtgttctcagtagccccaactctaatatgagtggcgtggtagtcacagccaac
ggtaacgatagtaagaaatttaaaggagaagataaaatggatggggctccctctcgtgta
cttcacattcgaaagttacctggtgaagtgactgaaacagaagttattgctttaggttta
ccttttggtaaggtgactaacatccttatgctgaaaggaaaaaaccaggcatttttggaa
ctggcaacagaggaagcagctattactatggttaattactattctgctgtgacacctcat
cttcgtaaccaaccaatttacatccagtactccaatcacaaagaactaaagacagataat
acattaaaccaacgtgctcaagtagttcttcaagctgtgacagctgtccagacagcaaat
acacctcttagtggcaccacagtcagtgagagtgcagtgactccagcccagagtccagta
cttagaataattattgacaatatgtactaccctgtaacacttgatgtccttcaccaaata
ttttctaagtttggtgctgtattgaagataatcacatttacaaaaaacaaccagtttcag
gctttgctccagtatggtgatccagtaaatgctcaacaagccaagctagccctagatggt
caaaatatttataatgcttgctgtaccctaaggattgatttttccaaacttgtgaatttg
aatgtaaaatacaacaatgataaaagtagggattatactcgacctgatcttccatctgga
gacggccagcctgcgttagacccagccattgctgcagcatttgccaaggagacatccctt
ctagggcttcctgttgcagctgttccaggggctctcagtcctttggctattccaaacgct
gctgcagcagctgctgccgctgccgctggccgagtgggcatgcctggagtctcagctggt
ggcaatacagtcctgttggttagcaatttaaatgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggagatgtgcagcgtgtgaagattttgtacaataagaaa
gacagtgctctgatacagatggctgatgggaaccagtcccagctcgccatgaatcatctt
aatgggcagaagatgtatggaaaaattattcgtgttactctctctaaacatcagactgtg
caactacctcgagagggacttgatgatcaagggctaacaaaagattttgggaattcacca
ctgcaccgttttaaaaagccgggatccaaaaactttcagaacattttccctccttctgct
acccttcacctgtctaacatccccccttctgtagcagaagaggatctgcgaactctgttt
gccaacaccgggggcactgtgaaagcatttaagttttttcaaagagatcacaaaatggct
cttcttcagatggcaacagtggaggaagctattcaggctttgattgatcttcataattat
aaccttggagaaaaccatcatctgagagtgtctttctccaagtcaacaatctaa
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