KEGG   Mus caroli (Ryukyu mouse): 110291016
Entry
110291016         CDS       T05910                                 
Symbol
Bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110291016 (Bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcal03041]
    110291016 (Bcas2)
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110291016 (Bcas2)
Spliceosome [BR:mcal03041]
 Complex B
  Other components
   Prp19 complex
    110291016 (Bcas2)
 Complex C
   Prp19-CDC5 complex
    110291016 (Bcas2)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110291016 (Bcas2)
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 Relaxase_C INO80F Tup_N Uso1_p115_C PRKG1_interact DUF3450
Other DBs
NCBI-GeneID: 110291016
NCBI-ProteinID: XP_021013613
Ensembl: MGP_CAROLIEiJ_G0025448
UniProt: A0A6P5P9F9
LinkDB
Position
3:97247010..97254603
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESNWVSLVSKNYEIERTIVQLENEIYQIKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcacgggcttggtagccggagaggtggtggtagatgcgctaccatattttgac
caaggctatgaggcgccaggcgtgcgggaagcggcggcggccctggtggaggaggagacg
cgcagataccgacctaccaagaactacctgagctacctaacggctccggattattctgcc
tttgaaacagacataatgagaaatgaatttgaaaggcttgctgctcgacaaccgattgaa
ttactcagcatgaaacgatatgaacttccagccccttcctcaggtcaaaaaaatgacatt
actgcttggcaagaatgtgtaaacaattctatggctcagttggagcaccaggcggtccgg
atcgagaatctggagctgatgtcacagcatggatgcaatgcctggaaggtgtacaacgaa
aatctcgttcatatgattgaacatgcacagaaagagcttcagaagttaaggaaacacatt
caagatttgaactggcagcgaaagaacatgcagcttacagctggatctaagctgagggaa
atggagtcaaactgggtgtcgctggtgagtaagaactatgagattgagcggacgattgtc
cagctggagaacgagatctatcagatcaagcagcagcacggggaggccaacaaggaaaac
atccgccaagacttctaa

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