Mus caroli (Ryukyu mouse): 110291086
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Entry
110291086 CDS
T05910
Symbol
Pcdh10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110291086 (Pcdh10)
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110291086 (Pcdh10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110291086
NCBI-ProteinID:
XP_021013687
Ensembl:
MGP_CAROLIEiJ_G0024967
UniProt:
A0A6P5P9K6
LinkDB
All DBs
Position
3:39527877..39585054
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AA seq
1057 aa
AA seq
DB search
MIVLLFFALLWMVDGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTVANSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGGGGGEGGGGGGGAGLPPQQQRTGTALLTIRV
LDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRAREL
FGLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISF
STVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAP
LDREAGDSYTLTVVARDRGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGA
YIYAVSATDRDEGANAKLTYSILECQIQGMSVFTYVSINSDNGYLYALRSFDYEQIKDFS
FQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLL
TRVAAVDADDGENARLTYSIVRGNEMNLFRLDWRTGELRTARRVPAKRDPQRPYELVIEV
RDHGQPPLSSTATLVVQLVDGAVEPQGGGGDRGGGSGEHLRPSRSGGGETSLDLTLILII
ALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGNGSSTCCGRQARARKK
KLSKSDIMLVQSANVPSNPAQVPVEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPC
SPSRSTDAEHNPCGAIVTGYSDQQPDIISNGSILSNENKHQRAELSYLVDRPRRVNSSAF
QEADIVSSKDSGHGDSEQGDSDHDVTNRGQSAGMDLFSNCTEECKALGHSDRCWMPSFVP
SDGRQAADYRSNLHVPGMDSVPDTEVFEPPEVQPGAERSFSTFGKEKALHGTLERKELDG
LLSNTRAPYKPPYLKMLWMQLRGEAHLTKDGGKQTTT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctgttattctttgccttgctctggatggtggacggagtcttttcccagctt
cattatactgtgcaggaagagcaggaacatggcactttcgtggggaatatcgccgaagac
ctgggcttggacattacaaaactttcagctcgcaggtttcagacggtggccaactcacgg
accccttacttggacctcaatctggagaccggggttctgtacgtaaacgaaaagatagat
cgcgagcagatctgcaagcagagcccctcttgtgtcctgcacctggaggtctttctggag
aacccgctggagctgttccgagtggagatcgaagtgctggacatcaatgacaaccctccc
tccttcccagagcccgacctgacagtagagatctcagagagcgccacgccaggcacccgc
tttcccttggagagcgccttcgacccagacgtggggaccaactccttgcgagactacgag
ataaccccaaatagctacttctcgctagacgtacagacccagggagatggcaaccgattc
gccgagctggtcctggagaagccactggaccgagaacagcaagcggtgcaccgctacgtg
ctgaccgcggtggacgggggaggagggggaggaggaggggaaggagggggaggcggtggg
ggagccggcctgcccccccagcagcagcgtactggcacggccttgctcactatccgagtg
ctcgactccaacgacaatgtacccgcttttgaccaacccgtctacacagtttccctacca
gagaattctccccctggcacgctagtgatccagcttaatgccaccgaccctgatgaaggc
cagaatggcgaggtcgtgtactcgttcagtagtcacatttcacccagggctcgggagctc
ttcggactgtcgccgcgcaccggccggctggaggtgagcggcgagctggactatgaagag
agcccagtgtaccaggtgtatgtccaagccaaggacttgggtcccaatgctgtgcctgcg
cactgcaaggttctagtgagagtgctggatgccaacgacaacgcaccagagatcagcttc
agcacagtgaaagaggcggtgagcgagggtgcggcccctggcacggtggtggctctgttc
agcgtgaccgatcgggactcggaggagaatgggcaggtgcagtgtgagcttctgggagac
gtgccgttccgcctcaagtcttccttcaagaattactacactatcgtgaccgaagctccc
ttggaccgagaggctggggactcctacaccctgaccgtggtggcccgcgaccggggcgag
cctgcactctccaccagtaagtcgatccaggttcaagtgtcagatgtgaatgacaatgcg
ccgcgcttcagccagcctgtctacgacgtgtatgtgacagaaaacaatgtgccgggtgcc
tacatttacgcggtgagcgccacggaccgcgacgaaggggccaatgcaaaattaacctac
tctatcctagagtgccagatccaaggaatgagtgtcttcacctacgtgtccatcaactca
gacaacggctacttgtacgccctgagatccttcgactatgagcagatcaaggacttcagc
tttcaagtagaagcccgggatgccggcagtccccaggcgctggccggcaatgccacagtc
aacatcttgatagtggatcagaacgacaacgcccccgccatcgtggcgccccttccgggg
cgcaacgggactccagcccgcgaggtgctgccgcgctctgcggaacccggctacctgctc
actcgtgtggccgcagtggacgcggacgatggcgagaacgccaggctcacctacagcata
gtgcggggcaacgaaatgaacctctttcgactggactggcgcaccggagagctccgcacc
gcgcgccgggtcccagccaagcgcgacccccagcggccttatgagctggtgatcgaggtg
cgcgaccacgggcagccacccctgtcctccacagccaccctggtggttcagctggtggat
ggagcggtggagccacagggcgggggcggggaccgaggcggagggtccggggagcacctg
cgccccagccgctctggcggcggggaaacttcactggacctcacactcatccttatcatc
gccctgggctctgtgtccttcatattcctgctggccatgatcgtgttggctgtgcgctgt
cagaaagagaaaaaactcaacatctacacgtgtctcgcgagcgattgctgcctctgctgc
tgctgctgcggcaatgggagctccacctgctgcggccgccaagcccgggcgcgcaagaag
aaactcagcaagtcagatatcatgttggtgcagagcgccaacgtccctagcaacccggcc
caggtgccggtagaggagtccggaggcttcggttctcatcaccacaatcagaactattgc
tatcaggtctgcctcaccccggagtccgccaagaccgacctgatgttcctgaagccctgc
agcccttcccggagtacagatgctgagcacaatccctgcggagccatcgtcaccgggtac
agcgaccagcaaccagacatcatttccaacggaagcattttgtccaacgagaataaacac
cagcgagcagagctcagctatctagttgacagacctcgccgagttaacagttctgcattc
caggaagctgacatagtaagctctaaggacagtggtcatggagacagtgaacagggagac
agtgatcatgacgtcaccaaccgtggccagtcagctggtatggatcttttctccaactgc
accgaggaatgtaaggcactgggccactctgaccgatgctggatgccttcttttgtccct
tcggatggacgccaggctgcagattaccgcagcaacctgcatgtccccggcatggactct
gttccagacaccgaggtctttgaacctccagaagtccagcctggggcagagcgctccttc
tccactttcggcaaagagaaggccctgcatggcaccctggagaggaaggagttggacgga
ttgctgtctaatacacgagcgccttacaaaccaccatatttgaaaatgctgtggatgcag
ctgcgcggagaggctcatttgacgaaagatggaggcaagcaaacaaccacatga
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integrated database retrieval system
