Mus caroli (Ryukyu mouse): 110291229
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Entry
110291229 CDS
T05910
Symbol
Fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00900
Terpenoid backbone biosynthesis
mcal01100
Metabolic pathways
mcal05164
Influenza A
mcal05166
Human T-cell leukemia virus 1 infection
Module
mcal_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110291229 (Fdps)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110291229 (Fdps)
05164 Influenza A
110291229 (Fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mcal01006
]
110291229 (Fdps)
Enzymes [BR:
mcal01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
110291229 (Fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
110291229 (Fdps)
Prenyltransferases [BR:
mcal01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
110291229 (Fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
110291229
NCBI-ProteinID:
XP_021013900
Ensembl:
MGP_CAROLIEiJ_G0025186
UniProt:
A0A6P5PA07
LinkDB
All DBs
Position
3:complement(81819697..81828476)
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AA seq
420 aa
AA seq
DB search
MPLSRWLRSLGVFLLPAPCWAPRERWLGFLQRPSLAYGCPVLGAWHSARWWCQVWTEEPR
AFSSSVRMNGNQKLDVYNQEKQNFIQHFSQIVKVLTEKELGHPDIGDAIARLKEVLEYNA
LGGKYNRGLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRR
GQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTL
DLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILM
EMGEFFQIQDDYLDLFGDPNVTGKVGTDIQDNKCSWLVVQCLLRASPQQRQILEENYGQK
DPEKVARVKALYEALDLQSVFFKYEEDSYNRLKSLIEQCSAPLPPSIFMELANKIYKRRK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcccgctggctgagatctctgggggtcttcctgctgccagccccctgctgg
gcaccccgggagaggtggcttggtttcctacaacgaccctccctggcatatgggtgtcca
gtcctgggggcctggcacagtgcccgctggtggtgccaagtgtggacagaggagcctcga
gcatttagctcctctgtcagaatgaatgggaatcagaaattggatgtttataaccaagaa
aagcagaatttcatccagcacttctcccagatcgtcaaggtgctgactgagaaggagctg
ggacacccagacataggggatgctattgcccggctcaaggaggtcctagagtacaatgcc
ttaggaggcaagtacaaccggggtttgaccgtggtacaagccttccaggagcttgtggag
ccgaagaaacaggatgctgagagtcttcagcgggccctgacagtgggctggtgtgtagaa
ctgctccaggctttcttccttgtgtcagatgacatcatggactcttccctcactcgccgg
ggacagatctgctggtatcagaagccaggcataggcttggatgccatcaacgacgctctg
cttctggaagcctccatctatcgtttgctgaagttctactgcagggagcagccctactac
ctgaacctgctggagctctttctgcagagttcttatcagactgagatcgggcagactcta
gacctcatgacagcaccccagggccatgtggatcttggtagatacactgaaaagaggtac
aaatcgattgtcaagtacaagacggctttctactctttctacctgcctattgcggctgcc
atgtacatggcaggcattgatggggagaaggaacacgccaatgccctgaagatcctgatg
gagatgggcgagttcttccagatccaggacgactaccttgatctctttggagaccccaat
gtgacaggaaaggtcggcactgacatccaggacaacaaatgcagctggctggtggttcag
tgtctgctacgagcctctcctcaacagcgccagatcttagaggagaattatgggcagaag
gacccagaaaaagtggctcgggtgaaagcactgtatgaggcgctggatctgcagtctgtt
ttcttcaagtatgaggaagacagttacaaccgcctcaagagtctcatagagcagtgctct
gcacccctgcccccatccatcttcatggaacttgcaaacaagatctacaaacggagaaag
tga
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