KEGG   Mus caroli (Ryukyu mouse): 110291284
Entry
110291284         CDS       T05910                                 
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110291284 (Dhx36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110291284 (Dhx36)
   03012 Translation factors [BR:mcal03012]
    110291284 (Dhx36)
Enzymes [BR:mcal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110291284 (Dhx36)
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     110291284 (Dhx36)
Translation factors [BR:mcal03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    110291284 (Dhx36)
SSDB
Motif
Pfam: OB_NTP_bind DEAD Helicase_C HA2_C HA2_N AAA_22 AAA_19 nSTAND3 PhoH AAA_14 ATPase AAA_23 NPHP3_N DUF6782 ResIII
Other DBs
NCBI-GeneID: 110291284
NCBI-ProteinID: XP_021013996
Ensembl: MGP_CAROLIEiJ_G0025032
UniProt: A0A6P5PKV7
LinkDB
Position
3:complement(56177351..56214815)
AA seq 1000 aa
MSYDYHQSWGRDGGPRGSGQGSSGGGGGSRGSGGGGGGRGGRGRHPAHLKGREIGLWYAK
KQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKTDKDSEAQISWFAPEDHGYGTEV
SSEKKINSEKKLDNQEKKLLNQEKKTFRITDKSYIDRDSEYLLQENEPNLSLDQHLLEDL
QRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNY
IERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSIL
YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRGFMQGHVN
RQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVV
LSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSS
NTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIECPHPVD
WDDTKSRDCAVLSAILDLIKTQEKATPRNLPPRSQDGYYS
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgagctacgactatcatcagagctggggccgcgacgggggccctcggggctccggccag
ggctccagcggcggcggcggagggagccggggctcgggcggcggcggagggggccgcggc
ggccggggcaggcatcccgcacatcttaagggtcgcgagatcggcctgtggtacgccaag
aagcagacgcagaagaacaaggaggctgagaggcaggagagagctgtagtgcacatggat
gaacgtcgagaagagcaaattgtgcagctgctgaattcagtccaagctaagactgataaa
gattcagaagcgcagatatcctggtttgctcctgaggatcatgggtatggtactgaagtt
tcttcagagaaaaaaataaactcagagaagaaacttgacaaccaggaaaagaaattgctg
aaccaagaaaaaaagacatttaggatcacagacaaatcatatattgaccgagattctgag
tatttattgcaagaaaatgagccaaacctaagcttagatcaacatttactggaagattta
caaaggaaaaaaactgaccctcgatatatagagatgcagcgtttcagaaaaaagctgcct
tcatatggaatgcagaaggagctggtaaatctaatcaataaccatcaggtgacagtaata
agtggtgaaactggttgtggcaaaaccactcaggttacgcagttcatcttggataactac
atcgaaagaggaaaagggtctgcctgcagaatagtgtgtactcagccaagaagaattagt
gccatttcagttgctgagagagtggccacagaaagggcagagtcttgtggcaatggtaat
agtactggataccagattcgtctccaaagtcggttgccaaggaaacaaggttctatctta
tactgcacaacaggaatcattcttcagtggctccagtcagactcacgtttgtccagtgtt
agtcatattgtacttgatgaaattcatgaaaggaatctacagtcggatgttttaatgact
gttattaaagatcttctccattttcgatctgatctcaaagtaatattgatgagtgcaact
ttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacccggg
tttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataagatatgtt
ccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcagggtcatgtaaat
agacaagaaaaagaagaaaaagaggccatctataaggaacgctggccagcgtatataaag
gaactgcggacaagatactctgcaagtaccgtagatgttttgcaaatgatggatgatgat
aaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaagaggat
ggtgcaatattggtctttctaccaggctgggacaatatcagtactttgcatgatctcttg
atgtcacaagtgatgtttaaatcagataagtttctcattatacctttacattcactgatg
cctaccgtcaaccagacacaggtatttaaaaaaactcctcccggtgttcggaaaatagta
attgctaccaacattgcagagactagcatcaccatagatgatgtggtttatgtaatagat
ggagggaaaattaaagaaacacactttgacacacagaacaacatcagtaccatgtctgct
gagtgggttagtaaagctaatgccaaacagaggaaagggagagctggaagagttcagcct
ggtcattgttatcatctgtataatggtcttagagcaagtcttctagatgactaccaacta
ccagaaattttgagaactcctttggaagaactctgtttgcaaataaagatcttgagactg
ggtggaattgcttattttctgagtagattaatggatccaccatcaaatgaggcagtagta
ctctccataaaacacctaatggaactgagtgctttggataagcaagaagaattaacacct
cttggtgtccatttagcccgactgcctgttgagccacatattggaaaaatgattctcttt
ggagctttgttctgctgcttagatccagttctcaccattgctgccagtctcagctttaaa
gatcccttcgtcatcccattgggaaaagaaaagattgcagatgcaagaagaaaagaactg
gcaaaggaaactagaagtgatcacctgacagttgtgaatgcatttgagggctgggaagaa
gccaaacgacgtggtttcaggtatgaaaaggactactgctgggaatattttctgtcttca
aacacactacagatgctgcataacatgaagggacagtttgctgagcatcttcttggagct
ggatttgtaagcagtagaagtcccaaagatccaaaagctaatataaattcagataatgag
aagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaatccgacta
aatttgggtaaaaaaaggaaaatggtaaaagttcacacgaagtctgatggtctggtttct
attcatcctaaatctgtcaatgtggagcagacagacttccactacaactggcttatctat
cacctgaagatgagaacaagcagtatatacttgtacgactgtacagaagtgtcaccatac
tgcctcctgttctttggaggagatatttccatccagaaagataaggatcaggaaattatt
gctgtagatgaatggattgtgtttcagtctccagaaagaattgcccatcttgttaaggga
ctaagaaaggaactggatagccttctacaagagaagattgaatgccctcatcctgtagac
tgggacgacactaagtcaagagactgtgcagtactgtcagctattctagacttgatcaaa
actcaagaaaaggctactccaaggaacttgccaccacggtcacaggacggatattatagc
tga

DBGET integrated database retrieval system