Mus caroli (Ryukyu mouse): 110291439
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Entry
110291439 CDS
T05910
Symbol
Ssx2ip
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110291439 (Ssx2ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110291439 (Ssx2ip)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
110291439 (Ssx2ip)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
110291439
NCBI-ProteinID:
XP_021014257
Ensembl:
MGP_CAROLIEiJ_G0025722
UniProt:
A0A6P5PFC2
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Position
3:139597643..139635090
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AA seq
615 aa
AA seq
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MGDWMTVTDPVLCTENKNLSQYTSETKMSPSSLYSQHVLCSSVPLSKNVHGVFGVFCTGE
NIEQSISYLDQELTTFGFPSLYEESKSKEAKRELNIVAVLNCMNELLVLQRKNLLAQESV
ETQNLKLGSDMDHLQSCYSKLKEQLETSRREMIGLQERDRQLQCKNRSLHQLLKNEKDEV
QKLQNIIASRATQYNHDVKRKEREYNKLKERLHQLVMNKKDKNIAMDVLNYVGRADGKRG
SWRTDKTEARNEDEMYKILLNDYEYRQKQILMENAELKKVLQQMKKEMISLLSPQKKKPR
ERAEDSTGTVAISDIEDDSGELSRDSVWGLSCDTVREQLTNSIRKQWRILKSHVEKLDNQ
ASKVHSEGLSEEDVISRQDHEQETEKLELEIERCKEMIKAQQQLLQQQLATTCDDDTTSL
LRDCYLLEEKERLKEEWTLFKEQKKNFERERRSFTEAAIRLGLERKAFEEERASWVKQQF
LNMTNFDHQNSENVKLFSAFSGSSDPDNLIVHSRPRQKKPHSVANGVPACTSKLTKSLPA
SPSTSDFRQTHSCVSEHSSISVLNITPEESKPSEVARGSTDQKWSVQSRPSSREGCYSGC
SSAFTSAHEERDDLP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggagattggatgactgtgacagatccagttctgtgtacagaaaacaaaaatctctct
caatatacctcagaaacaaagatgtctccgtccagtttgtactcccagcacgttctgtgc
tcttcagtacctttatccaaaaatgtgcatggtgttttcggtgtcttctgcacaggagag
aacattgaacaaagtatttcctatcttgatcaggagctgaccaccttcgggtttccttcc
ttgtatgaagaatccaaaagtaaagaggcaaagagagaattaaatatagttgctgttctg
aactgtatgaacgagctgctcgtgcttcagcggaagaacctgctggcccaggaaagcgtg
gagacacagaacctgaagctgggcagtgacatggaccacctgcagagctgctactccaaa
cttaaggagcagttggaaacgtccaggcgggagatgatcgggcttcaggagagagacagg
cagctgcagtgcaagaacaggagtttgcatcagctcctgaagaatgagaaagatgaggta
caaaaattacaaaatatcatagccagtcgggctactcagtataatcatgatgtgaagagg
aaggagcgggaatataataagctaaaggagcgcctgcatcagcttgttatgaacaagaag
gataaaaacatagccatggatgttttaaattatgtgggtcgagctgatggcaaacgaggc
tcatggaggaccgacaaaacggaagccaggaatgaagatgagatgtacaaaattctgttg
aatgattatgagtaccgccagaagcagatcctgatggagaacgcggagctgaagaaggtc
ctccagcagatgaagaaggagatgatctctctcctgtctcctcagaagaagaagcccagg
gaaagagcagaggacagcacaggcactgttgctatctctgatatagaagatgactctggg
gaactgagcagagacagcgtgtggggcctttcctgtgacactgtgagagagcagctgaca
aacagcatcagaaagcagtggagaattttgaaaagtcatgtagaaaaactcgataaccaa
gcttcgaaggtacactcagagggccttagtgaggaggacgtcatctcacgacaagaccat
gagcaagagaccgagaaactggagctggagattgagcggtgtaaagagatgatcaaggct
cagcagcagctgttacagcagcagctggccaccacgtgtgacgatgacaccacctcactg
ctgcgagactgttacttgctggaagaaaaggaacgccttaaagaagagtggacccttttt
aaagagcaaaaaaagaattttgagagagaaaggcgaagctttacagaagctgccattcga
ttggggttagagagaaaggcgtttgaagaagagcgagccagctgggtaaagcagcagttt
ttaaacatgacaaactttgaccaccagaactcagaaaatgtgaaacttttcagtgccttc
tcaggaagttctgatccagacaatcttatagtccactcacggccacggcaaaagaagcca
cacagtgtggctaatggggtgccagcttgcacatcaaaactgactaaatctcttcctgcc
tcaccttctacttcagactttcgccagacacattcatgtgtgtctgaacacagctccatc
agtgtgctgaatataactcctgaagaaagtaaacccagtgaggtggcaagaggaagcacg
gatcagaagtggagcgtgcagtcgaggcccagctcgcgggaggggtgctacagcggatgt
tcctcggccttcacgagcgctcacgaggaacgagatgacttaccttag
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