Mus caroli (Ryukyu mouse): 110292207
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Entry
110292207 CDS
T05910
Symbol
Nphp4
Name
(RefSeq) nephrocystin-4 isoform X2
KO
K16478
nephrocystin-4
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110292207 (Nphp4)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
110292207 (Nphp4)
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NCBI-GeneID:
110292207
NCBI-ProteinID:
XP_021015027
Ensembl:
MGP_CAROLIEiJ_G0026859
UniProt:
A0A6P5PJZ5
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Position
4:142377432..142463546
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AA seq
1428 aa
AA seq
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MGSMDDWHRAFTQNTLVPPHPQRARQLGKESTAFQCILKWLDGPLIKQGILDMLSELECH
LRVTLFDVTYKHFFGRTWKTTVRPTNQPSKQPPRITFNEPLYFHTTLSHPSIVAVVEVVT
EGRKRDGTLQLLSCGFGILRIFGNKPESPTAAAQDKRLRLYHGTPRALLHPLLQDPIEQN
KFMRLMENCSLQYTLKPHPPLEPAFHLLPENLLVSGFQQIPGLLPPHGDTGDALRKPRFQ
KPTTWHLDDLFFTLYPSLEKFEEELVQLLISDREGVGLLDSGTLEVLERRLHVCVHNGLG
FVQRPQVVVLVPEMDVALTRSASFSRKISASSKNSSGNQALVLRSHLRLPEMVSHPAFAI
VFQLEYVFNSPSGADGSASSPTSISSVACMHMVRWAVWNPDLEAGPGKVTLPLQGGVQHN
PSRCLVYKVPSASMSSEEVKQVESGTIQFQFSLSSDSPTEHANGPRAGRRSFRKMPASPS
GTPALAARDLAAIQDSPVGPGLSLSQLTASPLSPALQSSSKPPPQLPDSSQSPEGPQLQA
ESVLESRVSHLEADLSQPASLQGTPAVEHLQELPFTPLHAPIVVGAQTRSSRSQLSRAAM
VLLQSSGFPEILDASQQPVEAVNPIDPVRFNPQKEELDCLRGNEIVLQFLAFSRAAQDCP
GTPWPQTVYLTFQFYRFPPETTPRLQLVKLDGTGKSGSGSLSHILVPINKDGSFDAGSPG
LQLRYMVDPEFLKPGEQRWFAHYLAAQTLQVDVWDGDSLLLIGSAGVQMKHLLRQGRPAV
QVSHELEVVATEYEQEMMAVSGDVAGFGSVKPIGVHTVVKGRLHLTLANVGHACEPRARG
SNLLPPSRSRVISNDGASFFSGGSLLIPGGPKRKRVVQAQKLADVDSELAAMLLTHTRAG
QGPQAAGQEADAVHKRKLERMRLVRLQEAGGDSDSRRISLLAQHSVRAQHSRDLQVIDAY
RERTKAESIAGVLSQAITTHHTLYATLGTAEFFEFALKNPHNTQHTVAIEIDSPELSIIL
DSQEWRYFKEATGLHTPLEEDMFHLRGSLAPQLYLRPRETAHIPLKFQSFSVGPLAPTQA
PAEVITEKDAESGPLWKCSAMPTKHAKVLFRVETGQLIAVLCLTVEPQPHVVDQVFRFYH
PELTFLKKAIRLPPWHTLPGAPVGMPGEEPPVHVRCSDPNVICEAQNVGPGEPRDVFLKV
ASGPSPEIKDFFVVIYADRWLAVPVQTWQVCLHSLQRVDVSCVAGQLTRLSLVLRGTQTV
RKVRAFTSHPQELKTDPAGVFVLPPHGVQDLHVGVRPRRAGSRFVHLNLVDIDYHQLVAS
WLVCLSCRQPLISKAFEITMAAGDGKGTNKRITYTNPYPSRRTYRLHSDRPELLRFKEDS
FQVAGGETYTIGLRFLPSGSAGQEEILIYINDHEDKNEETFCVKVLYQ
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcatggatgactggcacagagccttcacccagaacacactggtccctccccac
ccacagagagcacggcagcttgggaaggagtccacagcattccagtgcatcctgaagtgg
cttgacgggccactcattaagcagggaatcctagacatgctgtcggagcttgaatgccat
ctgcgagtgaccctcttcgatgtcacctacaaacatttctttgggaggacgtggaaaacc
acagtgaggcccaccaatcaaccctctaagcagccacctaggatcaccttcaatgagcca
ttgtacttccacacgaccttgagccaccccagcatcgtggctgtggtagaagtggtcact
gaaggcaggaagagggacggcaccctgcagctgctgtcctgtgggtttggaattcttcgc
atctttggcaataagccagaatctcccaccgctgcagcccaggacaaacggttgaggctg
tatcatggcaccccgagagccctcctgcacccacttctccaggatcccatagaacagaac
aagttcatgaggctgatggagaactgtagcctgcagtacaccctgaagccacacccaccc
ctggagcctgccttccacctgctccctgagaacctcctggtgtctggtttccagcagatc
cctggcctccttccgcctcatggggacacgggtgatgccctgcggaagcctcgcttccag
aagcctaccacatggcacttagatgacctcttcttcaccctgtacccttccctggagaag
tttgaggaggaacttgtgcagctgctcatcagcgaccgggagggggtcggcctgctggac
agcggcaccctcgaggtcctggagcggcgcctgcacgtctgcgtccacaacgggctgggc
ttcgtgcagaggccacaggtggttgtgcttgtgcctgagatggacgtggccttgacccgc
tcggccagcttcagcaggaaaatcagtgcctcttccaagaacagctctggaaatcaggct
ctagttttgagaagccacctgcggctcccggagatggtcagtcacccagccttcgccatc
gtcttccagctggagtacgtgttcaacagcccctcgggagcggatggcagtgccagctcg
cccacctcaatatccagcgtggcgtgcatgcacatggtccgatgggctgtttggaacccc
gatctggaagcgggcccaggaaaggtgacgctgcctcttcagggtggggttcagcacaac
ccctcacgctgtctggtctataaggtgccttcagctagcatgagctccgaggaggtaaag
caggtggagtccggaaccatccagttccagttctctctgagctcagacagccccacagag
catgccaacggccccagggcggggcgtcgttccttccggaagatgccggcatccccttca
ggcacaccagcactagctgcccgggatcttgctgcaatacaggactctcctgtgggccca
gggctctcgctctcccagctgacggcttccccgctgtccccggctctgcaaagctcttcc
aagccccctcctcagctcccagacagctctcagtccccagagggtccccagctccaggcc
gaatctgtattagagagtagggtctctcacctggaagccgacctgagccagccggcctcg
ctccagggaacgcctgctgtcgagcacctacaggaacttcccttcactcctctgcatgct
cccatcgtcgtgggagcacagaccaggagctctagaagccagctctccagagctgcaatg
gtgcttctgcagtcttctggcttccccgagatccttgatgccagccagcagccagtggag
gccgtcaatcccatagaccctgtgaggttcaaccctcagaaggaagagttggactgtctt
cgagggaatgagattgtgctgcagtttcttgccttcagcagagccgcccaggactgccca
ggaacgccgtggccacagactgtgtatctcaccttccagttttaccgtttcccacccgag
accacgccacgcctgcagctggtcaagctggatgggacgggcaagagcggctctggctcc
ctgtcccacatcctcgtccccattaataaagatggctcctttgatgctggctcccccggc
ctccagctgaggtacatggtggatcccgagttcctgaagccaggagagcagcgctggttc
gcccactacctggctgctcagacgctgcaggtcgacgtctgggatggagactccttgctc
ctcattgggtctgctggcgtccagatgaagcacctcctccgtcaagggcggccagctgtt
caggtctcacatgaactggaggtcgtggccactgaatacgaacaggaaatgatggccgtg
agcggcgatgtggctggcttcggcagcgtcaagcccatcggagtccacacggtagtgaag
ggccgcctgcacctgaccttggccaacgtgggtcacgcttgtgagccgagagcaagaggt
tccaacttgttgccgccatccaggtctcgggtcatctcaaatgatggagccagcttcttc
tctgggggaagcctcctcatacccggaggccccaagcgaaagcgtgtggtacaggcccag
aagctggctgatgtggacagcgagctggccgccatgctgctgacacacactcgagctggc
caggggccccaggctgcaggccaggaggcagacgctgtgcacaagcggaagctggagagg
atgcggctggtgcgcctgcaggaggctggaggggactctgacagtcgcaggatcagcttg
ctggcccaacacagcgtccgtgcacagcactcacgggacttgcaggtcattgatgcctac
cgggaacgtaccaaggccgagagcatcgccggagtgctaagccaggccatcaccacccac
cacacgctgtacgctacactgggcaccgctgagttcttcgagtttgcacttaaaaaccca
cacaacactcagcacacggtggccatcgagatcgacagccctgagctcagtatcatcctg
gacagccaggaatggaggtacttcaaggaggccaccggcctgcacacgcccctggaggag
gatatgttccacctgcgtgggagcctggcaccccagctctacctgcgaccccgggagact
gcccacatccccctcaagttccagagcttctccgtgggcccacttgctccgacacaggcc
cctgctgaggtgatcacagagaaggacgcagagtctggacccctttggaagtgcagcgcc
atgcctacgaaacacgccaaggtccttttccgggtggagactggccagctcattgctgtg
ctctgcctgaccgtggagccccagccccacgtggtggaccaggttttccgcttctaccac
ccagagctcaccttcctgaagaaggccatccgcctacctccctggcacacgcttccaggt
gctcctgtggggatgcctggcgaggaacccccagtccatgttcgatgcagtgacccgaat
gtcatctgtgaggcccagaacgtgggccccggtgagccgagagatgtgttccttaaggtg
gccagtggtccaagcccggagatcaaagacttctttgttgtcatctatgcggatcgctgg
ctggcggtgcccgtgcagacatggcaggtctgcctccactccctgcagcgtgtggatgtt
tcctgtgtcgcaggacagctgacccgtctgtccctcgtcctgcgggggacacagaccgtt
aggaaagtgagagctttcacctcccacccccaggagctgaagacagaccctgccggtgtc
tttgtgttgccacctcacggggtacaggacctgcatgtgggtgtgaggccaaggagggct
ggcagccgctttgtccatctcaacctagtggacatagactaccatcagctggttgcgtca
tggcttgtgtgcctctcctgccgccagccactcatctccaaggccttcgagatcaccatg
gcagcaggggatgggaagggcaccaacaagcgcatcacctacaccaacccctatccctct
cggaggacctaccgcctgcacagtgaccgccccgagctgttgcgcttcaaggaggactcc
ttccaggtggcgggaggagagacctacaccatcggcctgcggttcctgccaagcggcagc
gccgggcaggaggagatcctgatctacatcaacgaccacgaggacaagaatgaggagaca
ttctgtgtgaaggtcctctaccagtga
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