Mus caroli (Ryukyu mouse): 110292215
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Entry
110292215 CDS
T05910
Symbol
Nfx1
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110292215 (Nfx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110292215 (Nfx1)
04121 Ubiquitin system [BR:
mcal04121
]
110292215 (Nfx1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110292215 (Nfx1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
110292215 (Nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
110292215
NCBI-ProteinID:
XP_021015038
Ensembl:
MGP_CAROLIEiJ_G0025904
UniProt:
A0A6P5PK05
LinkDB
All DBs
Position
4:35067447..35122453
Genome browser
AA seq
1114 aa
AA seq
DB search
MAEAPPVSGTFKFNTDAAEFIPQERKTSGLNCGTQRRLDSSRIGRRNYSSSPPCHLPRHI
PYEDISAVHQHSYASGSKPKSPQGFFQSSNKSLKNHGLQNQPWQKSRNEKHQNRNKKAQG
LTEQTSDTSSLESVARSESGTNPREHSPSESEKEVVIADPRGAKPKKAAQLTYNYGRGPK
AKGRLRSEWGNRMSPKSEDENTRPVAISHTDSSDASCRKPVVDPCVCRRNEQRRYPQKRP
PWEVEGARPRPGRNPPKQESQRHMNAGPKNNMSPIPKDNLRERPAKSACDTGNLAVVSKS
SRRVDQEKTAVRRQDPQVLSPFPRGKQNHLLKNVETHTGSLIEQLTTEKYECMVCCELVQ
VTAPVWSCQSCFHVFHLNCIKKWARSPASHADGQSGWRCPACQNVSAHVPNTYTCFCGKV
KNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFTTKTCECGRTRHTV
RCGQPVSVHCSNACENILNCGQHHCAELCHGGQCQPCRIILNQVCYCGSTSRDVLCGTDV
GKSDGFGDFSCLKICGKDLKCGSHTCSQVCHPQPCQPCPRLPHLVRYCPCGQTPLSQLLE
HGSNARKTCMDPVPSCGKVCGKPLACGSSDFIHTCEKLCHEGDCGPCSRTSVISCRCSFR
TKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRC
EEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARIHECDHPVYHSC
HSEEKCPPCTFLTQKWCMGKHELRSNIPCHLVDISCGLPCSAMLPCGMHKCQRLCHKGEC
LVDEACKQPCTTPRGDCGHSCMAPCHPSLPCPVTACKAKVELQCECGRRKEMVICSEASG
TYQRIAAISMASKLMDMQLGDSVEISKLITKKEVQQARLQCDEECAALERRKRLAEAFDI
TDDSDPFNVRSSASKFSDSLKDDARKDLKFVSDVEKEMETLVEAVNKGKNNKKSHCFPPM
NRDHRRIIHDLAQVYGLESISYDSEPKRNVVVTAVRGKSVCPPTTLTSVIERESQTRPPP
PIPHHRHQADKTPGSSNLQKIVKEPEIDYFDVQD
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcctccggtctcaggcacttttaaattcaatacagatgctgctgagttc
attcctcaggagagaaaaacttctggtctaaattgtgggacccaaagaagactagattct
agtaggattggcagaagaaattatagttcctcgcctccctgtcaccttcctagacacatc
ccttatgaagacatctctgctgttcatcagcacagttatgcctctggaagcaaacctaag
agtccccagggttttttccagtcatctaataaatcactcaagaaccatggccttcagaat
cagccatggcagaaatcacggaatgaaaagcaccaaaacagaaacaagaaagcacaaggg
ctcactgagcaaacgtcagatacatctagtttagaaagtgtagccagatcagagagtgga
acaaaccctagagaacacagcccttccgagagtgagaaggaggtggttatcgcagatccc
aggggagcgaaacccaaaaaagcagcacagcttacatacaactatggcagaggaccaaag
gccaaagggagactcagaagcgagtggggtaatagaatgagcccaaagtctgaggacgaa
aataccagacctgtggcgatttcccacactgactcctcagatgcctcctgtagaaaacct
gtagtggatccatgtgtgtgcaggcggaatgagcagagaagatatccccagaaaaggcct
ccctgggaagtggaaggggccagaccacggccaggcaggaacccaccaaaacaggagagt
cagcggcatatgaatgcagggcccaaaaacaacatgtcccccattccaaaggataatctt
agagaaagaccagcgaagtcagcctgtgacactgggaatttggcagttgtcagcaagtct
tcgagaagggttgaccaagagaaaactgctgtaaggagacaggatccccaagtgctatct
ccttttcccagaggcaaacagaaccacctgctgaagaatgtggaaacacatacaggttcc
ctgattgagcagctaactacagaaaaatacgagtgtatggtatgctgtgagttggttcag
gtcacagccccggtgtggagctgtcagagctgttttcatgtctttcatctgaactgcatc
aagaaatgggcacgctctccagcatcgcatgcagatggccagagtggttggaggtgccct
gcttgtcagaatgtttctgcacatgttcctaatacctatacttgtttctgtggcaaagta
aagaatcctgaatggagcagaaatgaaattccacatagttgtggtgaggtttgtagaaag
aaacagcctggccaggactgtccacattcctgtaaccttctctgccatcctggaccctgc
ccaccctgccctgcttttacaactaaaacatgtgaatgtggacggaccaggcacacggtt
cgctgtggtcaacctgtctcagtccactgttctaatgcgtgtgagaatatcttgaactgt
ggtcagcaccactgtgctgagctgtgccatgggggtcaatgccagccttgtcggatcata
ctgaaccaggtgtgctactgtggcagcacctcccgagatgtgttgtgtggaaccgatgtg
ggaaagtctgatggatttggggacttcagctgtttaaagatatgtggcaaggacttgaag
tgtgggagccatacctgttctcaggtttgccaccctcagccttgtcagccttgcccacgg
ctcccccatttggtgcgatactgcccttgcggccaaacacctctcagccagttgctggaa
catggaagtaatgctcggaaaacatgcatggatcctgtcccttcctgtggaaaagtgtgt
ggcaaacccttggcctgtggttcctcagattttatccacacctgtgaaaagctctgccat
gaaggagactgtgggccgtgctctcgcacatcagtcatttcctgcagatgctccttcaga
acaaaggagcttccgtgtaccagtcttaaaagtgaagatgctacatttatgtgcgacaaa
cggtgtaacaagaaacgattgtgcggacggcataaatgtaacgagatctgctgtgtggac
aaggagcacaagtgtcctttgatttgtgggaggaaactccgctgtggccttcatcggtgt
gaagaaccttgtcatcgagggaactgtcagacctgctggcaagccagctttgatgaatta
acctgccactgtggcgcctctgtgatctacccaccagttccctgtgggactaggcctcct
gagtgtacccaaacctgtgccaggatccatgaatgtgaccatccagtatatcattcttgt
catagcgaagagaagtgtcccccttgtactttcctaactcagaagtggtgcatgggcaag
catgagttacgaagcaacatcccctgtcacctggttgatatctcttgcggattaccctgc
agtgccatgctaccctgtgggatgcacaaatgtcaaagactttgtcacaaaggagaatgt
cttgtggatgaggcctgcaagcagccctgtaccacacccagaggtgactgtggccactca
tgtatggcaccctgccaccccagtttaccctgccctgtgacagcttgtaaagccaaggta
gagttacagtgtgaatgtggaagaagaaaggagatggtgatttgctctgaagcatcgggg
acttatcaaagaatagctgctatttctatggcctctaaattaatggacatgcagcttgga
gactcagtggagatcagcaagctcattaccaagaaggaagtccaacaagccaggttgcag
tgtgatgaggagtgtgctgccctggaaaggagaaagagactggcagaggccttcgacatc
actgatgattctgatcctttcaatgtacgctcttcagcatcgaaattcagtgacagtttg
aaagacgatgccaggaaagacttaaagtttgtcagtgacgttgagaaggaaatggaaacg
ctcgtggaggccgtgaataagggcaagaataataagaaaagccactgcttcccccccatg
aacagagaccaccgccgaatcatccatgacctggcccaggtttatggcctggagagcata
agctatgacagcgaaccaaagcgcaatgtcgtggtcactgccgtcagagggaagtccgtt
tgtcctcctaccacgctgaccagtgtgattgaaagggagtcacagacacggccgccacca
ccaattcctcatcaccgacaccaggcagacaagactcccgggagcagtaatttacagaag
atagtgaaggagcccgagattgactactttgatgtccaggactga
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