Mus caroli (Ryukyu mouse): 110292219
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Entry
110292219 CDS
T05910
Symbol
Yars
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110292219 (Yars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcal01007
]
110292219 (Yars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcal03016
]
110292219 (Yars)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110292219 (Yars)
Enzymes [BR:
mcal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
110292219 (Yars)
Amino acid related enzymes [BR:
mcal01007
]
Aminoacyl-tRNA synthetase
Class I (A)
110292219 (Yars)
Transfer RNA biogenesis [BR:
mcal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110292219 (Yars)
Prokaryotic type
110292219 (Yars)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
110292219 (Yars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
110292219
NCBI-ProteinID:
XP_021015051
Ensembl:
MGP_CAROLIEiJ_G0026513
UniProt:
A0A6P5PK17
LinkDB
All DBs
Position
4:118990563..119020399
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AA seq
564 aa
AA seq
DB search
MQPDGTSVTVPGTRRRRRTRKGRGCRLSAGNRDSGAMGDAPSPEEKLHLITRNLQEVLGE
EKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMK
APWELLELRTSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHD
AKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFAEKYLPALGY
SKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDQKEDVKKKLKKAFCEPGNVENNGVLSFI
KHVLFPLKSEFVILRDEKWGGNKTYTVYLELEKDFAAEVVHPGDLKNSVEVALNKLLDPI
REKFNTPALKKLASAAYPGPSKQKPPAKGPAKNSEPEEVIPSRLDIRVGKILSVEKHPDA
DSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVDSQGMLLCAS
VEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQ
WKQTNFMTKLGFISCKSLKGGNIS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccgacgggactagcgtgacagttcccggcacgcggagacggcggcgaacgagg
aaagggcgcgggtgccggctgagcgcgggaaacagagacagcggagccatgggtgatgct
ccaagccctgaggagaagctgcaccttatcacccggaacctgcaggaggttctgggggaa
gagaagctaaaggagatcctgaaggagcgggaacttaaaatttactggggcacggccacc
acaggcaagccacatgtggcttactttgtacccatgtccaagatcgctgacttcttgaag
gcagggtgtgaggtaaccatcctgtttgcggacctccatgcatacctggacaacatgaaa
gccccctgggagcttctagaacttcgaaccagttactatgagaatgtgatcaaggccatg
ctggagagtattggcgtgcccttggagaagctcaagtttatcaaaggcaccgactaccag
ctcagcaaagagtacacactggatgtgtaccgactgtcctctgtggtcacacaacacgat
gccaagaaggcgggggctgaggttgtgaagcaggtggagcaccctttgctgagtggtctg
ctgtaccccggtctgcaggctttggatgaggagtacttaaaagtagatgcccagttcggc
ggtgtggatcagaggaagatttttacctttgcagagaagtatcttcccgcacttggctac
tcaaaacgggtccacctgatgaatcccatggtccctgggttaactgggagcaaaatgagc
tcgtcagaagaggagtccaaaatcgacctccttgatcagaaggaggacgtgaagaaaaag
ctgaagaaagccttctgtgagccgggcaatgtggagaacaacggggttctgtccttcatc
aaacatgtcctcttccctctcaagtctgagtttgtgatcctgagagatgagaagtggggt
ggaaacaagacctacaccgtttacctagagctggagaaggacttcgctgctgaggtcgta
caccctggagacctaaagaattctgttgaagtcgccctgaacaagttgctggaccccatt
agagaaaagtttaatactccagccctgaagaagctggccagtgctgcctacccgggacct
tcaaagcagaagcctcctgccaaaggccctgccaagaactcagaaccagaggaagtcatc
ccatcccggctggatattcgtgtgggcaaaatcctcagcgtggagaagcacccagatgca
gatagcctgtatgtggagaagattgatgtgggggaagctgaacccaggactgtggtgagc
ggcctcgtacagtttgtgcccaaagaagaactgcaggacaggctggtggtggtgctgtgc
aatctgaaaccccagaagatgagaggcgtggactcgcagggcatgctactgtgtgcttct
gtagaaggggtgagccgccaggttgaacctctggaccctcctgctggctctgctcctggt
gaacgagtattcgtacagggctatgagaagggccagccagatgaggagctcaaacccaag
aagaaagtctttgagaagctgcaggccgactttaaaatttctgaggagtgcatcgcacag
tggaagcaaaccaacttcatgaccaagctgggattcatctcctgtaaatcactaaaaggg
ggtaacatcagctag
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