Mus caroli (Ryukyu mouse): 110292339
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Entry
110292339 CDS
T05910
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110292339 (Chd5)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110292339 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110292339
NCBI-ProteinID:
XP_021015284
Ensembl:
MGP_CAROLIEiJ_G0026857
UniProt:
A0A6P5PNT7
LinkDB
All DBs
Position
4:142237530..142290186
Genome browser
AA seq
1952 aa
AA seq
DB search
MRGPLGTEEELPRLFAEEMENEEEMSEEEDGGLEGFEDFFPAEPVSLPKKKPKKLKESKS
SKGKRKKKEGSNDEMSENEEDLEEKSESEGSDYSPTKKKKKKLKEKKEKKAKRKKRDEDE
DDNDDGGLKEPKSSGQLMAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVPQTLPVR
KAKTKEGKGPGVRKKNKGAKDSKKKGRGKRVAGLKFRFGGISKRKKGSSSEEDEREDSDL
DNASIHSSSVRSECSAALGKKNKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTC
PRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDEEEEEGGCEEEEDDHMEFCRV
CKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPP
APFVVGLPGPEVEPGMPPPRPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRN
YQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHS
FDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVK
KGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDT
ILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYT
GDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEW
ACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNL
EGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYK
FILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVK
SSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQE
AIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK
KVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELF
KDDVEGMMSQGQRPTTPIPDIQSTKGGSLTAGAKKKHGSTPPGDNKDVEDSSVIHYDDAA
ISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWE
KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQGACEWQDELSDNQSEYSIGSED
EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR
WGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQ
HVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVPEGPEGKKPGEVISSDPNTPVPASPAQL
PPAPLGLPDKMEAQLGYTDEKESGMQKPKKSLEIQALPTALDRVEGEDKHQSSDSKDRAR
EERTEEVEKAQGSPEQPLKEEVLPDKEPIPDKPELSLSHSGDFRPDDPKTEEKEPGETQQ
NGDREEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDY
WLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVI
EEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLN
QLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQM
YNNSFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggaggagatggag
aacgaggaggagatgtcagaagaagaagacggtggccttgaaggctttgaggacttcttc
cctgcagagcctgtgagccttcccaagaagaagccgaagaagctgaaagagagcaagtcc
tccaaaggaaaaaggaagaagaaagaggggagcaatgacgagatgtcagaaaatgaggag
gacctggaagagaagtcagagagcgaaggtagcgactactcacccaccaagaagaagaag
aagaaactgaaggagaagaaggagaagaaggccaagcggaaaaagagggatgaggatgaa
gatgataacgacgacggaggcttgaaggagcccaagtcctcgggacagctcatggcggag
tgggggctggacgatgtggactacctgttttctgaggatgactaccacacactgaccaac
tacaaagccttcagccagttcctcaggccccttattgccaagaagaatccgaagatcccc
atgtccaaaatgatgactgtcctgggggccaagtggcgagaattcagcgccaacaacccg
tttaagggtagctcggcagcagcagctgcggcagccgtggccgcggctgtggagacggtg
accattgctcctcccttggccatcagtccccagcaagtgccccagactctgcccgtacga
aaggccaagaccaaagagggcaaggggcccggagtgaggaagaagaacaaaggcgccaaa
gattccaagaaaaagggcaggggcaagagagtggcagggctcaagttccgcttcggaggg
atcagcaagaggaagaagggttcctcgagcgaggaggatgaacgggaggactcagacttg
gacaatgccagcatccacagctcttctgtgcgttctgagtgctctgcagctctgggcaag
aagaacaagaggaggcgcaagaagaagaggattgacgatggtgacggctatgagacagac
caccaggactactgtgaggtgtgccaacagggaggcgagatcattctctgtgacacctgc
ccgagggcgtatcacctggtctgcctggacccggagctggagaaggctccagagggcaag
tggagctgcccacactgtgagaaggaggggatccagtgggagccgaaggatgatgatgaa
gaggaggaggagggcggctgtgaggaagaggaggatgaccacatggagttctgccgcgtg
tgcaaggacggtggcgagctcctgtgctgtgatgcctgtccctcctcctaccacttgcac
tgcctcaacccgccgctgccggagataccgaacggtgaatggctctgcccgcgctgtaca
tgtcccccgctgaagggcaaagttcagcggatcctacactggaggtggacagaacccccg
gctccctttgtggtggggctgccaggaccagaggtggagccaggcatgcccccgcccagg
cctctggagggcattcctgagagagagttctttgtcaagtgggctggtctctcctactgg
cactgctcctgggtgaaggagctacagttggagctgtaccacaccgtgatgtatcgcaac
taccaaagaaagaatgacatggacgaaccgccgccctttgattacggctctggcgatgag
gacggtaagagcgagaaacggaagaacaaggaccctctctacgccaagatggaggaacgc
ttctaccgctacggcatcaagcccgagtggatgatggtccaccgcatcctgaaccacagc
tttgacaagaagggggacatacattacctgatcaagtggaaggacctgccctacgaccag
tgcacctgggaaattgatgagattgacatcccctactacgacaacctgaagcaggcctac
tggggccacagggagctgatgctgggggaagatgccaggctgcccaagcggctggtgaag
aagggcaagaagctgaaggacgataaacaagagaagccacccgatacgcccatcgtggac
cccacagtcaagttcgacaagcagccatggtacatcgacgccacaggaggcacactgcac
ccttaccagctggagggccttaactggttacgcttctcctgggcccagggcactgacact
atcctggctgacgagatgggtttggggaagacagtacagaccattgtgtttctctattct
ctgtacaaggagggccactccaaggggccttacctagtcagtgcgcccctgtccaccatc
atcaactgggaaagggagtttgagatgtgggcgcctgacttttacgtggtcacctacacg
ggggacaaggagagccgctctgtgatccgtgagaacgagttttcctttgaggacaacgcc
attcgcggtgggaagaaagtattccgcatgaagaaggaagtgcagatcaaattccacgtg
ttgctcacctcttatgagctcatcaccattgaccaagccatcctgggctccatcgagtgg
gcctgcctcgtggtggacgaggctcaccggctcaagaacaaccagtccaagttctttagg
gtcttgaatagctacaagattgactacaagctactgctgacagggacccccctccagaac
aacctggaggaactgttccatctcctcaacttcctgactccagagaggttcaacaatctg
gaaggcttcttggaggagtttgccgacatatccaaggaagatcagatcaaaaagctgcat
gatctgttggggccgcacatgcttcggcggctcaaggccgatgtgttcaagaacatgccg
gctaagacagagctgattgtccgagtggagctgagccagatgcagaagaagtactacaag
ttcatcctgactcggaactttgaggcgctcaattccaaggggggtggcaaccaggtgtct
ctactcaatatcatgatggatctgaagaagtgctgcaaccatccgtacctcttccctgtg
gctgctgtggaagcccctgtgttgcccaatggctcctacgacggcagctccctggtcaag
tcttcagggaagctcatgctgctgcagaagatgctgaagaaactgcgggacgaagggcac
agagtgctgatcttctcccagatgaccaagatgttggacctcttggaggacttcctggag
tacgagggctacaagtatgagcggatcgacggcggcatcactgggggcctccggcaagag
gccatcgacagattcaacgctcccggggcccaacagttctgcttcctgctctcaacacgg
gccggtggcctgggcatcaacctggccacagctgacacggtcatcatctatgactcagac
tggaaccctcacaatgacatccaggcctttagccgtgctcaccgcatcgggcagaacaaa
aaggtcatgatctaccgctttgtgacacgggcctccgtggaggagcgcatcactcaggtg
gccaagcgtaagatgatgctcacacacctagtggtgcggcctggcctgggctccaagtcg
ggctccatgaccaagcaggaactggatgatatcctaaagttcgggacagaggagcttttc
aaggacgacgtggaaggcatgatgtcccagggccagaggcctaccacacccatccctgac
atacagtctaccaagggcggatctctgaccgccggcgcaaagaaaaagcacggcagcacc
ccgccaggtgataacaaagatgtagaagacagcagtgtgatccattatgacgacgcagcc
atatccaagctgctggatcggaaccaggacgccacggatgacaccgagctgcagaacatg
aacgagtacctgagctccttcaaggtggctcagtatgtggtccgcgaggaagatggcgtg
gaagaggtagagagggaggtgatcaagcaggaggagaacgtggaccctgactactgggag
aagctgctgcgccatcactatgaacagcagcaggaggacttggcccgcaacctgggcaag
ggcaagcgcatccgcaagcaggtcaactacaatgatgcctcccaggaggaccagggtgcg
tgtgagtggcaggatgagctctcggacaaccagtcggagtattccattggttctgaggat
gaggacgaggactttgaggagcgaccagaagggcagagtggacgacgacaatccaggagg
cagcttaagagtgacagggacaagcccctgcctccccttctggctcgggttgggggcaac
attgaggttctgggcttcaatgccagacagaggaaggcttttttgaacgccatcatgcgc
tggggcatgccacctcaggatgccttcaactcccactggctggtgcgggaccttcgaggg
aagagtgagaaggaatttagggcctatgtatcactcttcatgcgccacctgtgtgagccg
ggcgcagacggcgcggagaccttcgcagacggcgtgccccgggagggcctgtctaggcag
cacgtgctcacgcgtattggggtcatgtcgctggttaggaagaaggtgcaggagtttgag
catgtcaacggcaagtacagcaccccagacctggtccccgaggggcccgagggcaagaag
ccgggcgaggtcatctcctcagaccccaacacacccgtgcctgccagccctgcacagctc
ccaccggccccactgggcctgccagacaaaatggaagcccagctgggctacacagatgag
aaggagtcaggcatgcagaagccaaagaagtccctggaaatccaggccctgccaactgcc
ctggacagagtagagggtgaagacaaacatcagagctcagacagcaaggacagggctcgg
gaggagaggacagaagaggtggagaaggcccaggggtctccagagcagccactgaaagag
gaagtgctgccggacaaggagccgatcccagacaagccggagctgagcttgagtcacagt
ggggatttcaggccagatgaccccaagactgaggagaaggagcccggggagactcagcaa
aacggcgacagagaggaagacgaggaaggcaagaaagaagacaagaacgggaaattcaaa
ttcatgttcaacattgcagatggcggtttcacagagctgcacactctgtggcagaatgag
gaacgggcagctgtgtcctcggggaaaatctacgaaatctggcaccgccgtcacgactac
tggctgctggcaggcattgtgacgcatggctatgcccgctggcaggacattcagaatgac
ccgagatacatgatcctaaatgaacctttcaagtctgagatccacaagggcaactacttg
gagatgaagaacaagtttttggcccgtaggttcaagctgctggagcaggcgctggtgatc
gaggagcagctccggagggcagcgtacctcaacatgacccaggatcccaaccacccagcc
atggcgctcaatgctcgcctggcagaggtggagtgccttgccgagagccaccagcaccta
tccaaggagtccctcgccggaaacaagcctgccaacgccgtcctgcacaaggtcctaaac
cagctggaggagctgctgagtgacatgaaagcagatgtgacacgcttgccctccatgttg
tcacgcatccctccggtggccgcccgtctgcagatgtctgaacgcagcatcctgagtcgc
ctgaccaaccgagccggtgaccccaccatccagcagggcgctttcggctcctctcagatg
tacaacaacagctttgggcccaacttccggggccctggaccgggagggattgtcaactac
aaccagatgcccctggggccctatgtgactgacatctag
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integrated database retrieval system
