Mus caroli (Ryukyu mouse): 110292562
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Entry
110292562 CDS
T05910
Symbol
Rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110292562 (Rnf38)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110292562 (Rnf38)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110292562 (Rnf38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
110292562
NCBI-ProteinID:
XP_021015588
Ensembl:
MGP_CAROLIEiJ_G0025961
UniProt:
A0A6P5PJT3
LinkDB
All DBs
Position
4:complement(38202307..38311567)
Genome browser
AA seq
514 aa
AA seq
DB search
MREISPGANSAPLPGHPNKVIGERVRLESLFPLLPSDQNTTIQEDAHFKAFFQSEDSPSP
KRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPP
VRRQRGRRERLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQN
AVMVDIHDQLHQGTVPVSYTVTTVAPHGLPLCTGQHIPACSTQQVPGCSVVFSGQHLPVC
SVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQS
RSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPP
FMPRRLTGRSRYRSQQPMPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYE
ALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPC
NHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatatctcccggggccaattcagcacctctacctggccatcctaacaaggtg
attggtgaaagggtgagacttgagagcctgttccctctcctcccaagtgatcagaacact
accattcaagaggatgctcacttcaaagctttcttccagagtgaagatagtccaagtcct
aagagacagcgcctctctcattcagtctttgattatacatcagcatcaccagctccctca
ccaccaatgcgaccatgggagatgacatcaaataggcagcccccttcagttcgaccaaat
caacatcacttctcaggggagcgctgtaacacacctgcacgcaacagaagaagtcctcct
gttaggcgccagcgaggaagacgggaacgtctgtctcgacataattccattagtcaagat
gaaaactatcaccatctcccttatgcacagcagcaagcaatagaggaacctcgagccttc
caccctccgaatgtatccccccgtctgttacatccagctgctcatcccccccagcagaat
gcagtcatggttgacatacatgatcagctccatcaaggaacagttcctgtctcctacacg
gtaaccacggtggcaccccatgggcttccactctgcacgggccagcacatccctgcttgc
agtacacagcaggtcccaggatgctcagtggttttcagtggacaacacctcccggtctgt
agtgtgcctcctccaatgcttcaggcatgttcagttcagcacttaccagtaccatatgct
gcgttcccgcccctcatttctagtgatccgtttcttatacatcctcctcatctttctccc
catcatcctccccacttgccaccaccaggccaatttgtccctttccaaacacagcagtca
cgatcgcctctgcagaggatagaaaatgaagtggagctcttaggagaacatcttcaagta
ggcagttttacttatcccccttcagcccatcccccaacattacctccgtcagctcctttg
cagttcctgacacatgaccctttgcatcaggaggtgtcctttggagtaccttatccacca
tttatgcctcggagactcacaggacgtagtagataccgatcccagcagccaatgccccct
cctccttaccatcccagcttactaccatacgtgctatcaatgcttccagtaccacctgca
gtgggcccaaccttcagctttgaattggatgtggaagacggagaagttgaaaattatgag
gccctgttaaacttggcagagagactgggagaggcgaaacctcggggactgactaaggca
gacattgaacagcttccttcgtacaggttcaatcctagcaaccaccagtcagagcagact
ttgtgtgtagtatgcatgtgtgattttgagtcaaggcagcttcttagagtcttaccttgt
aaccacgagttccatgccaagtgtgttgataaatggcttaagggaaaccgtacctgccca
atttgccgagctgatgcttcagaagtgcatcgggattcagagtga
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