Mus caroli (Ryukyu mouse): 110292703
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Entry
110292703 CDS
T05910
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110292703 (Frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mcal04091
]
110292703 (Frem1)
Lectins [BR:
mcal04091
]
C-Type lectins
Lecticans
110292703 (Frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
110292703
NCBI-ProteinID:
XP_021015883
Ensembl:
MGP_CAROLIEiJ_G0026121
UniProt:
A0A6P5PLY9
LinkDB
All DBs
Position
4:complement(75573775..75723908)
Genome browser
AA seq
2172 aa
AA seq
DB search
MHSPGYTGPKAQLFLLLQLLLLHLDRASATFISINRGLRVMKGSSAFLSGDHLRFAVPKE
KDACRVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYVHNGCPILDEDSVKLRLYRFTET
DTFMETFLLRVYLVEPDCNIIRMSSNVLEVTEFYGLSQAIDKNLLQFDYGRTASLDCTIR
LDLLRTQLPAHGKLVVVNRKSEGPRGDQPHSFFSETELGAGLKCPDGSCALESKQVASLK
VSCEEFLLMGFHYQHMQPPSPNVDYIPIQLDLTDRRSKTVYKSESAWLPVYIRVGIPNQV
PRAAFMAMFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLLDHTRP
ISSFTWKDLSDMQVAYQPPNSSHPERRHYTMELEVYDFFFERSAPITIHISIRTADTNAP
RVSWNTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLVTIGGLQHGRLTVREGKGFLFTVT
DLQAGVVRYHHDDSDTTKDFVAFRIFDGHHSSHHKFPINILPKDDSPPFLITNVVIELEE
GKTILIQGSMLRASDMDSSDDYIFFNITKFPQAGEIMKKPGPRLIGYPVPGFLQRDLFSG
IIYYRHFGGEIFEDSFEFVLWDSHDPPNLSVPQVVTIHITPVDDQLPKEAPGTSRHLVVK
ETEVAYITKKHLHFLDMESRDGELIYTVTRPPCFSFSHRHLDAGKLFMVDSIPKLTKNPT
APGLSSFTQHAVNHMKVAYMPPMQDIGPSPRHVQFTVSVSNQHGGALHGICFNITVLPVD
NQVPEVFTNTLRVAEGGQCTISTEHILVSDVDTPLDSISLSLKEMPLHGGVELDGFPLNP
RGTFSWQDLNTLKVWYQHDGSEVLQDEIFLEVTDGTNSAAFVLHIEVFPVNDEPPVLKAD
LIPMMHCSEGGEVTITPEYISATDADSDDLELLFLIAREPQHGVVRKAGLHVDRFSQGDV
ISGAVTYKHTGGEIGLEPCSDTVFLVVSDGEADPLMNGCCYDGPDSSVPLHKSFPTYQLN
ITVHPVDNQPPSIIIGRMLTVDEGFSAALTTHHLTVVDRDTAPDDLKFILASQPQFGYLE
NTLPSAGFEKSNMGISIASFQWTDMKASHINYVQSRHLRVEPTADQFTVYATDGKHRSLE
TTFHIIINPTNDEAPDLVVQNITVDEGHMIELDSSIISATDRDVPKDPLLFSIALKPQHG
LLINAAISKDSHQIKQLQHEIHSFSTDLLKNGMKLAYAHDDSESSADNFVIQLSDGKHKI
LKTISVKITPVNDETPTLSKKAEISMAVGDTRVLSSAVLSATDKDSPREKIHYVFERLPQ
NGQLQLKIGRDWVPLSAGMQCTQEDVDLNLLRYTHAGKTDSQEGDSFTFYLWDEDNRSPA
FNCHIIIEDMGKGDIVIHAKPLVVAKGDRGLLTTATLLAVDGADKPEELLYLITSPPQHG
QVEYVHSPGVPIASFSQMDIAGQTVCYIHKSRTAVPADSFRFTISNGLQTQRGVFEITLQ
TVDSALPVLTKNKRLRLAEGAMGLLSADHLQLTDPDTPPENLTFFLTQLPSHGYLYLRGK
ALQHNFTQRDVDSGGVAYQHSGGGAREDSFTFLAADRKNQGFVVDGKVQKEPVRFTIQVD
QLDKAAPHITHLHSPTQVGLLKNGCYGIYITSHVLKASDPDTEDDQIMFKILRGPLYGRL
ENTTTGEFIHERFSQKDLSRKTILYIINPSLQVTSDILEFQAMDPTGNTATPQSLELRWS
YIEWSQTAYEVCENVGLLPLEVTRRGYPMDSAFVGVEVNQVSATVGKDFTVTPSKLLQFD
PGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTQTKAAVKILDSKGGRCHPSNSF
NQSKHSTWGKGPWHPLPSGSSSLTTSGSPLLERPPPSFTNGDALQGFGLTDLTQRKTMTS
GNGKSVLPSSVCRNGTDTIYNYHGIVSLKLEGDRFSAHKRKAKISIVSQPQRTIKVAELP
LADKVESTTDSHFLRQGLRPLFPKNCSVELKGLFHFEESTHRLYQCDGITWKAWSPQTKG
LEDRSCPGGWLLHSGYCHILVTRQKGTWTTATRACREQHQGDLVTVLSRRHMQWLWAMSG
RKPFWIGLKNQVRTGRWEWIGGEPVAFTNWRRGAPLHPKPGKNCALVQKRGQWQTKNCSK
GKAHNFVCSRKL
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgcactctccaggctacactgggcccaaggctcagttgttcttgctgctccagctgctt
ctgctgcacctggaccgggccagtgccaccttcatcagcatcaaccggggcctgagggtg
atgaagggtagttctgccttcctgtctggagatcacctgaggtttgcggtccctaaagaa
aaggatgcctgcagagtggaggtggtgatgaatgagcccataacccagagggttgggaaa
ctcactccacaggtctttgattgccattttcttcccaacgaagtgaagtatgttcacaat
ggatgcccaattctggacgaagactctgtgaagcttagactttacaggtttactgaaaca
gacacctttatggaaacctttctcctgcgggtttatcttgtggaaccagactgtaacatc
atccgtatgagcagtaatgttttggaagtgactgaattctatggcttatcgcaagccatt
gataagaacctgctccaatttgattatggtaggactgccagcctggattgcaccatcaga
ctagacctactgaggactcagctgccagcccacggcaagctggttgtggtgaatcgtaag
tcagaagggcctcggggagatcagccacacagctttttctctgagacagagctaggggct
ggactgaagtgtccagatggaagctgtgccctggaatcgaagcaagtggcaagtctgaaa
gtgagctgtgaggagtttctgctgatggggtttcactaccaacacatgcagcccccttca
cccaacgttgattacatccccattcagttggatctcacggacagaaggagcaaaaccgta
tacaagtcagagagtgcgtggttgcccgtctatatcagagttggcattcctaaccaggtc
ccaagggctgcatttatggccatgtttgttctggaggtggaccagttcatactgacccct
ctgacaacctccgttctggactgtgaggaggatgagactccgaaacccttgttggtgttc
aacatcactaaagccccgctccagggctatgtgacccacctgctggatcataccagaccc
atctcttcattcacctggaaggatctcagtgacatgcaagttgcctaccagccaccaaac
agcagccaccctgagaggagacattacacgatggagctggaggtgtacgacttcttcttt
gagaggagtgcccccatcactatccacatctccatcagaacagcagacacaaatgcacca
cgggtgtcttggaatacaggtttgaatctcctggaggggcagtctcgggccatcacttgg
gaacaatttcagatagttgacaatgatgacatcggtgctgtgcagttggtcaccattggt
ggcctgcagcatggacggcttacagtaagagaggggaaaggatttctcttcactgtgact
gaccttcaagctggagttgtccgctatcatcacgatgacagtgataccactaaagacttt
gtggctttcaggatattcgatggccaccacagcagccaccacaagtttcctatcaacatc
ttgcctaaagatgacagccccccattcctcatcaccaatgtcgtcattgaactagaagag
gggaagaccatcttgattcaagggtctatgctgagagcttcagatatggactccagtgat
gactacatcttctttaatatcacaaagttcccacaggctggggagatcatgaagaagcca
gggccgagactgatagggtatcctgtccctggcttcctgcagagagacctgttcagtgga
atcatttactaccgtcactttggtggagaaatctttgaagattcttttgaattcgtcctg
tgggacagccatgaccctccaaatctctcagtgccacaggtggtgacaattcatatcact
ccagtagatgaccagcttcctaaagaagctcctggcacttcccggcatttggttgtcaag
gaaacagaggtggcctacatcactaaaaagcacctacatttcctagacatggaatcccgt
gatggggaactcatctacacagtaacacgccctccatgtttctccttcagccacagacac
ttggatgctgggaagctattcatggtggacagcataccaaagctaaccaaaaatccgaca
gccccagggctaagttcatttactcagcatgccgtgaaccatatgaaagtggcctacatg
ccacccatgcaagatataggcccctcccctcgacatgtgcagttcacagtgtctgtcagt
aaccagcatggaggtgctttgcatggaatctgcttcaacatcacagttctcccagtggac
aaccaggttcccgaggtattcaccaacaccctgcgagtggccgagggtggtcagtgcacc
atcagcacagagcacattttggtttctgatgtggacaccccactggacagcatcagcctc
tctcttaaggagatgcctctgcatggtggggtagagctggacggatttcctctaaaccca
agaggcacattttcttggcaagacctcaataccttaaaagtttggtatcaacatgatgga
tctgaggttcttcaggatgagatatttttggaggtcacagatggcacaaattcagcagca
tttgttctccacattgaggtattccctgtgaatgatgagccacctgttctgaaggctgac
ctcatccccatgatgcactgctcagagggtggagaggtgaccatcactcctgaatacatt
tctgctactgatgcagacagcgatgacttagaactgctgtttctgattgcccgagagcct
cagcatggagtggtgagaaaggctggactccacgtggacaggttctctcagggagatgtc
atctcaggagctgtgacatacaaacatacaggtggcgagattggccttgaaccttgttct
gacactgttttcttggtggtttcggatggtgaagctgaccctttgatgaatggctgttgc
tacgatggacctgattcatctgttcctcttcataagtcctttcccacatatcagctcaac
atcacagtgcatccagtcgacaaccagccaccttcaattataataggtaggatgctcaca
gtggatgaaggcttctcagcagcccttactactcatcacttgactgttgttgaccgggac
actgccccggatgacttaaaattcattttggcttctcagccccagtttggctacttagaa
aacacactgccttctgcaggctttgagaaaagtaatatgggcataagcatagcctcattc
cagtggacagacatgaaggcttcacacattaactatgtgcagtccaggcacctgagagta
gaaccaactgctgaccagttcacagtatatgccacagacgggaagcaccgctccttggag
acaacattccacattatcatcaaccctacaaacgatgaagctcctgaccttgtggtacag
aacatcactgtggatgagggtcacatgatagaactggattcttccatcatcagtgctact
gacagggatgttcccaaggaccccttgctcttcagcatcgctctcaagccccagcatggc
ctcctcatcaatgcggccatcagcaaggactcccatcagatcaagcagctgcaacacgaa
atccacagcttctccacggaccttctcaagaatggaatgaagctggcctatgcccacgac
gactcagagagctctgctgataacttcgtgatccagttgtcagacgggaaacataaaatc
cttaaaaccatctcagtaaaaatcaccccagtgaatgatgagacaccaacgctaagcaag
aaggctgaaatctcaatggctgtgggcgatactcgtgtcctgtctagtgctgttctttca
gccacagataaagactcacccagagagaagattcactatgtatttgaaagacttccccaa
aatggacaacttcaacttaagatagggagggactgggtccctctctccgctggcatgcag
tgtacccaggaggatgtggacctgaacttgctaagatacacacatgctggtaaaacggac
tcccaggaaggagacagcttcaccttctacctctgggacgaggacaacaggtcacctgca
tttaactgtcacatcatcattgaagacatgggcaaaggtgatattgtcattcatgcaaaa
ccactcgtggtagccaaaggtgacagaggtctcttgacgactgccactcttctggctgtg
gatggagcagacaagcctgaagaactgctctacctcatcacctccccaccacagcatggc
caagtggagtacgtccactctcctggagtccccattgccagcttcagccaaatggacata
gcaggacagacggtgtgctacatacacaagagcaggacagctgtccccgctgacagcttc
agatttaccatcagcaatggactgcagacccagcgtggggtgtttgagatcacactgcag
actgtggacagcgccttgcctgtgctgaccaagaacaaaaggctgaggctagccgaaggg
gccatgggcctcctgtccgctgatcaccttcagctgactgaccccgacacacctccagag
aacctgaccttctttctgactcagctcccaagccacgggtacctctacctgagagggaaa
gcactccaacacaacttcacccagcgagatgtggacagcgggggcgtggcctaccagcac
tcaggaggcggcgcccgggaggacagctttacttttctagctgcagacaggaagaaccaa
ggctttgttgtggatgggaaagttcagaaagagcctgttcgcttcacaattcaggtggat
cagctggacaaggcagcgccccacatcacacacttgcactcccctactcaagtgggactc
ttgaaaaatggctgctatgggatttatatcacttcccatgtgctgaaggcatcagaccct
gacacggaggatgaccagatcatgtttaagattttacgaggcccattgtacggacgtctg
gagaacacaacaacaggtgaattcatccatgagcgatttagccagaaggacttaagccgt
aagaccatcctttacatcataaacccttctttgcaagtgacttccgatatcctggaattt
caggccatggaccccacagggaacactgccactccccagagcttggagttgagatggtcg
tatattgaatggtcccagactgcatatgaggtttgtgagaatgtgggcttattgcccttg
gaagttaccagaaggggatatcccatggactcagcctttgtgggtgtagaggttaaccaa
gtgtcagctacagttggaaaagattttactgtcactccatccaaactgcttcaatttgac
ccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagat
gatgaggtctttgaagtaattctgaactcccctgtgaatgcggttcttggcacacagaca
aaagcggcggtgaaaattttggactcaaaaggaggacggtgccatccttcaaattccttc
aaccaaagcaagcacagcacgtgggggaagggcccttggcatccgctgccctcaggctca
tcctcgctcaccacttccggttctcctcttctggaaaggcctcctccatctttcaccaat
ggagatgctcttcagggttttggtctcaccgacctcactcaaaggaagacaatgacctcg
gggaatggcaaatcagttctcccatcctctgtttgtagaaatggaacagacaccatctac
aattaccatggcatagtttccttgaaactagagggcgacagattctcagctcacaaacgg
aaggccaaaatatccattgttagtcagccacagaggacaatcaaggtggcagagctgcct
ctagctgataaggtggaatccacaaccgattcgcactttctcagacagggtctgcggccc
ttgtttccaaagaactgttctgtggaattaaagggactctttcattttgaagaaagcacc
cacagattgtatcaatgtgatgggatcacctggaaagcctggagcccccaaaccaagggg
ctggaggacagatcctgcccaggtggatggctccttcattctggctactgtcacatcttg
gtcacaaggcagaaaggcacctggaccacagctacccgagcttgcagagaacagcaccag
ggtgaccttgtgaccgtactctccagaaggcatatgcagtggctatgggcgatgagtgga
agaaagcccttctggataggattgaagaaccaagttcggactggccgctgggagtggatc
ggaggtgaacctgttgcttttaccaactggaggagaggggcccctctgcacccgaaacct
ggaaagaactgtgctttggttcagaaaagaggacaatggcagacaaagaactgtagcaaa
ggcaaggctcacaattttgtgtgctcacggaaactctga
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integrated database retrieval system
