Mus caroli (Ryukyu mouse): 110292782
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Entry
110292782 CDS
T05910
Symbol
Podn
Name
(RefSeq) podocan
KO
K25037
podocan
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcal00535
]
110292782 (Podn)
Proteoglycans [BR:
mcal00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
110292782 (Podn)
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
110292782
NCBI-ProteinID:
XP_021016011
Ensembl:
MGP_CAROLIEiJ_G0026260
UniProt:
A0A6P5PJD8
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Position
4:complement(100125507..100142675)
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AA seq
614 aa
AA seq
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MAGSRGLPLLLLVPQLFLGPVLPVRAPVFGRSDTPTLSPEENEFVEEENQPVLVLSSEEP
ELGPATIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPEELSRL
QRLETLNLQNNRLTSRGLPEEAFEHLTSLNYLYLANNKLTLAPRFLPNALISVDFAANYL
TKIYGLTFGQKPNLRSVYLHNNKLADAGLPDHMFNGSSNVEILILSSNFLRHVPKHLPPA
LYKLHLKNNKLEKIPPGAFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNN
LSRVPAGLPRSLVLLHLEKNVIQSVEADVLTPIRNLEYLLLHSNQLQAKGIHPLAFQGLK
KLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGREDFATTYFLEELNLSYNRITSP
QMHRDAFRKLRLLRSLDLSGNRLQTLPPGLPKNVHVLKVKRNELAALARGALAGMAQLRE
LYLTGNRLRSRALGPRAWVDLAGLQLLDIAGNQLTEVPEGLPPSLEYLYLQNNKISAVPA
NAFDSTPNLKGIFLRFNKLAVGSVVESAFRRLKHLQVLDIEGNFEFGNGSKDRGHKDEEE
EEEEEEEDEEEETR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcaggggcctgccactcctactgctggtgcctcagctcttcctgggccct
gtgctgcctgtgagggcacctgtgtttggccgaagtgacacccccaccctgagccccgag
gagaatgaatttgtggaggaagagaatcagccagtgctggttctgagctccgaggagcca
gagcttggcccagccaccatcgactgtccccgagattgtgcctgttcccaggaaggtgtc
gtggactgtggtggcattgacctgcgtgagtttccaggcgacctgcccgagcacaccaac
catctctccttgcagaacaaccagctggagaagatctacccggaggagctgtccaggctg
cagcggctggagacgctgaacctgcaaaacaaccgcctgacatcccgagggctcccagag
gaggcatttgagcatcttactagcctcaattacctgtacctggccaacaacaagctgaca
ttggcaccccgattcctgccaaacgccctgatcagtgtggacttcgctgccaattatctc
actaagatctatggactcacctttggccaaaagccaaatctgaggtctgtgtacctgcat
aacaacaagctagcagatgccgggctcccggaccacatgttcaacggctccagcaacgtc
gagatcctaatcctgtccagcaacttcctacgccacgtgcccaagcacctgccacctgct
ctgtacaagctgcacctcaagaacaataagctagagaagatcccccctggggccttcagt
gagctgagcaacctacgggaactgtacctgcagaacaactacctgacggatgagggtctg
gacaacgagaccttctggaagctgtccagcctggagtacctggacttgtccagcaacaac
ctgtcgagggtcccagcgggtcttccccgcagcctggtcctgctgcacctggagaaaaat
gtcatccagagcgtagaagctgatgtgctgacacccatccgcaacctggagtacctgctg
ttacacagcaaccagctgcaggccaagggtatccacccactggccttccagggcctcaag
aaactccacacagtgcatctatacaacaacgcgctggaacgtgtgcccagcggcctgccc
cgccgagtgcgcaccctcatgatcctgcacaaccagattacgggcataggccgtgaggac
ttcgccaccacctacttcctggaagagctcaacctcagctacaaccgcatcaccagccct
cagatgcaccgagacgccttccgcaagctacgcctgctgcgttcacttgacttgtctggc
aaccgcctgcaaacgctgcctccaggcctgccgaaaaacgtacatgtgctcaaagtcaag
cggaatgagctggctgccctggcacggggggcactagctggcatggcccagcttcgggaa
ctctacctcacaggcaaccgactgagaagccgggccctgggaccccgtgcctgggtggac
cttgctggtctgcagctgctggacatcgctgggaatcagctcacagaggtccctgagggg
ctccccccatctctggagtatttgtacctgcagaataacaagattagtgccgttcctgcc
aacgcctttgactccactcccaacctcaaggggatctttctcaggttcaacaagctggct
gtgggctccgtggtggaaagcgccttccggaggctgaaacacctgcaggtcttggacatt
gaaggcaactttgagtttggtaatggttccaaggaccgtggccacaaagatgaggaagag
gaagaagaggaggaggaggaagatgaggaagaggaaactagatag
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