Mus caroli (Ryukyu mouse): 110292855 Help Entry 110292855         CDS       T05910                                  Symbol Tnc Name (RefSeq) tenascin isoform X1   KO K06252   tenascin Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04151   PI3K-Akt signaling pathway mcal04510   Focal adhesion mcal04512   ECM-receptor interaction mcal05165   Human papillomavirus infection mcal05206   MicroRNAs in cancer Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110292855 (Tnc)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110292855 (Tnc)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110292855 (Tnc)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     110292855 (Tnc)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110292855 (Tnc)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mcal00536]     110292855 (Tnc) Glycosaminoglycan binding proteins [BR:mcal00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110292855 (Tnc) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  EGF_TEN fn3 EGF_Teneurin Fibrinogen_C EGF_2 EGF_Tenascin Ig_DSCAM-DSCAML_C Fn3_Dep-1_2nd EGF Pur_ac_phosph_N hEGF DUF4998 FN3_Tor_3rd Interfer-bind NDNF fn3_2 GH101_dom-5 Motif Other DBs NCBI-GeneID:  110292855 NCBI-ProteinID:  XP_029332682 Ensembl:  MGP_CAROLIEiJ_G0026099 UniProt:  A0A6P7QWG5 LinkDB All DBs Position 4:complement(58062335..58150537) Genome browser AA seq 1655 aa AA seqDB search MGAMTWLLPGIFLALFALTPEGGVLKKIIRHKRESGLNMTLPEENQPVVFNHIYNIKLPM GSQCSVDLESASGEKDLTPTPESSGSFQEHTVDGENQIVFTHRINIPRQACGCAAAPDVK ELLSRLEELELLVSSLREQCTMGTGCCLQPAEGRLDTRPFCSGRGNFSAEGCGCVCEPGW KGPNCSEPECPGNCNLRGQCLDGQCICDEGFTGEDCSQLACPNDCNDQGRCVNGVCVCFE GYAGPDCGLEVCPVPCSEEHGMCVDGRCVCKDGFAGEDCNEPLCLNNCYNRGRCVENECV CDEGFTGEDCSELICPNDCFDRGRCVNGTCYCEEGFTGEDCGELTCPNDCQGRGQCEEGQ CVCNEGFAGADCSEKRCPADCHHRGRCLNGQCECDDGFTGADCGDLQCPNGCSGHGRCVN GQCVCDEGYTGEDCSQRRCPNDCHNRGLCVQGKCICEQGFKGFDCSEMSCPNDCHQHGRC VNGMCICDDDYTGEDCRDRRCPQDCSQRGRCVDGQCICEDGFTGPDCAELSCPSDCHGHG RCVNGQCICHEGFTGKDCKEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPNDCSN QGQCVSGRCICNEGYTGIDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH ADGLEMQFRVPGDQTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKF KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE ISLHIVKNNTRGPGLKKVTTTRLDAPSHIEVKDVTDTTALITWFKPLAEIDSIELSYGIK DVPGDRTTIDLTHEDNQYSIGNLRPDTEYEVSLISRRVDMASNPAKETFITGLDAPRNLR RVSQTDNSITLEWRNVKADIDSYRIKYAPISGGDHAEIDVPKSQQATTKTTLTGLRPGTE YGIGVSAVKGDKESDPATINAATEIDAPKDLQVSETTQDSLTFFWTTPLAKFDRYRLNYS LPTGQSMEVQLPKDATSHVLTDLEPGQEYTVLLTAEKGRHKSKPARVKASTEAEPEVDNL LVSDATPDGFRLSWTADEGIFDSFVIRIRDTKKQSEPQEITLPSPERTRDITGLREATEY EIELYGISRGRRSQPVSAIATTAMGSPKEIMFSDITENAATVSWRAPTAQVESFRITYVP MTGGAPSMVTVDGTDTETRLVRLTPGVEYQVSVIAMKGFEESDPVSGTLITALDGPSGLL IANITDSEALAMWQPAIATVDSYVISYTGERVPEVTRTVSGNTVEYELHDLEPATEYILS IFAEKGQQKSSTIATKFTTDLDSPREFTATEVQSETALLTWRPPRASVTGYLLVYESVDG TVKEVIVGPDTTSYSLADLSPSTHYSARIQALSGSLRSKLIQTIFTTIGLLYPFPRDCSQ AMLNGDTTSGLYTIYINGDKTQALEVYCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAAG FGDRREEFWLGLDNLSKITAQGQYELRVDLQDHGESAYAVYDRFSVGDAKSRYKLKVEGY SGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQG VNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA NT seq 4968 nt NT seq  +upstreamnt  +downstreamnt atgggggccatgacctggctactaccaggcatctttctagctttgtttgccctcactccc gaaggtggggtcctcaagaaaatcatcaggcacaagcgagagagtgggctaaacatgacc ctgccagaagagaatcagccagtggtgttcaaccacatctacaacatcaagttgcccatg ggttctcaatgctcagtggatctggagtcagcaagtggggagaaagacctgacccccacg ccagagtccagtgggagcttccaggaacatacagtggatggggaaaaccaaattgtgttc acacaccgcatcaacatcccccgccaggcctgtggctgtgctgcagctccagatgtgaag gagctcctgagcaggctggaggagctggagttgctggtatcgtctctaagggagcagtgc accatgggtacaggctgttgcctccaacctgcagaaggtcgtctggacactaggcccttc tgcagcggacggggcaacttcagtgcagaaggctgcggctgtgtctgtgaaccaggctgg aaaggccccaactgctctgagcctgaatgccctgggaactgtaatctcagaggccagtgc cttgacggccagtgtatctgtgacgagggtttcactggggaagactgcagccagctggcc tgtcccaacgactgcaatgaccagggcaggtgtgtgaacggggtctgtgtgtgcttcgaa ggctatgccggcccggactgtggcctggaagtctgcccagtgccctgcagcgaggaacac gggatgtgtgtggatggcaggtgtgtgtgcaaagatggctttgcgggtgaggactgcaat gagcccctttgcctcaacaactgctacaaccgtgggcgatgtgtggagaacgagtgtgtc tgcgacgagggcttcactggcgaggactgcagtgagctcatttgccctaatgactgcttc gaccgaggtcgctgtgtcaatggcacctgctactgtgaagaaggtttcacgggcgaagac tgtggtgaactcacctgccccaacgactgtcagggccgtggccagtgtgaggagggacag tgtgtttgcaacgagggctttgcaggggcagactgcagtgaaaagcggtgtcccgccgat tgtcaccaccgtggccgctgcctcaacgggcagtgtgagtgtgacgatgggttcacaggg gctgactgtggggatctccagtgtcccaatggctgcagtgggcatggccgttgtgtcaat gggcagtgcgtgtgtgacgagggctacaccggagaagactgcagccagcggcgatgcccc aatgactgccacaaccggggtctctgcgtacagggcaagtgcatatgtgaacaaggcttc aagggctttgactgtagtgagatgagctgtcccaatgactgccaccaacatggccgctgt gtgaatggcatgtgtatctgtgatgacgactacactggggaagactgcagagaccggcgc tgtccccaggactgtagccagcgggggcgctgtgtagacggacagtgcatctgtgaggat ggcttcactggccctgactgtgctgagctttcctgtcccagtgactgccacggccatggc cgctgtgtgaatggccaatgcatctgccacgagggcttcactggcaaagactgcaaagag caaaggtgccccagtgactgccatggccaaggccgctgtgaggacggccagtgtatctgc catgagggcttcacgggcctggactgtgggcagcgctcctgtcctaatgactgcagcaac caaggacaatgtgtgtcaggccgctgcatctgcaatgaaggttacacagggatagactgc tctgaggtgtcccctcccaaagaccttattgtgacagaagtaacagaggagactgtaaat ctggcatgggacaatgagatgcgggtcactgagtacctcattatgtacacacccacccat gctgatggcctggagatgcagttccgtgtgcctggggaccagacatccaccaccatccgg gagctggagccaggagtggagtacttcattcgtgtgttcgccatcttggaaaacaagagg agcatccctgtcagtgccagggttgccacctatttgcctgcaccggaaggtctaaagttc aagtctatcaaggagacatctgtggaagtggagtgggatcctctagacattgctttcgaa acatgggagatcattttccgaaatatgaacaaagaagatgagggagagatcacaaaaagt ctgaggagaccagagacctcttaccgccaaactggccttgctcctggccaagagtatgaa atatctctgcacattgtgaaaaacaacacccgaggccccggcttgaagaaagtaaccaca acccgcctggatgcccccagccatattgaggtaaaagatgtcacagacaccacagcactg atcacctggttcaagcccttggctgaaattgatagcattgagctctcctatggcatcaag gatgtacctggagaccgtaccaccatcgacctcacacacgaagacaaccagtactccatc gggaacctgagacctgacacggagtatgaggtgtccctcatctcccgcagagtggacatg gcaagcaaccctgccaaagagaccttcatcacaggcctggatgctcccaggaatctccgc cgtgtctcacagacagacaacagcatcaccttggagtggaggaacgtcaaggcagacatc gacagttacagaattaagtatgcccctatctctggaggtgaccatgctgagatagatgtt ccaaagagccagcaagccacaaccaaaaccacactcacaggtctaaggcctggaactgaa tatgggattggtgtttctgctgtcaagggagacaaggagagtgatccagcaaccatcaat gcggccacagaaatcgatgcacccaaggacctacaggtgtctgaaaccacacaagacagt ttgacgtttttctggacgacacccctggccaagtttgatcgttaccgcctcaactacagc ctccccacaggccagtcgatggaagtccagctgccaaaggatgccacctcccatgtcctg acagacctggagccagggcaagaatacactgtcctcctcactgccgagaagggcagacac aagagcaagcctgcacgtgtgaaggcatccaccgaagctgaaccggaagttgacaacctt ctagtttcagatgccactccagacggtttccgtctgtcctggactgctgatgaagggata ttcgacagttttgttatcaggatcagagataccaaaaagcaatctgagccacaagaaata accctcccttcccccgaacgtaccagggacataacaggtctcagagaggccactgagtac gaaattgaactctatggaataagccgtggaaggcgatcccagccagtcagtgccatagca acaacagccatgggttctccaaaggaaatcatgttctcagacatcactgaaaatgcagcc acagtcagctggagggcacctactgctcaggtggagagtttccggatcacttatgtacct atgacaggaggtgccccgtccatggtgaccgtggatggaacagatactgagacgaggctg gtgaggcttacccctggggtagaataccaagtcagtgtgattgccatgaagggattcgaa gaaagcgatccagtctcggggactctaatcacagctctggatggtccatctggtcttctg atagctaacatcacagactcagaagccttggccatgtggcagccagccattgccactgtg gacagttatgtcatctcctacacaggggagagagtgccagaagttacacgcacagtgtct ggaaatacagtggagtatgagctgcatgacctggagcctgccacagagtacatcctgagt atctttgcagagaaaggacagcagaagagctctaccatcgctaccaagtttaccacagac ctcgattccccaagagaatttacagctacagaggttcagtcggaaactgccctccttacc tggagacctccccgagcatcggtcactggatatctcctggtctatgaatctgtggatggt acagtcaaggaagtcattgtgggacctgacaccacctcctacagcctggcagacctgagc ccatctacccactactcagcaaggatccaggcattgagtgggtccctgaggagcaagctg atccaaaccatcttcaccacaattggactcctgtacccattccccagggactgctctcaa gcaatgctgaatggtgatactacctctggcctctacaccatctatataaatggtgacaag acccaagcactggaagtctactgtgatatgacctctgatggaggtggatggattgttttc ctgagacgcaaaaatggacgtgaggacttctatcgcaactggaaggcctatgctgctggg tttggagaccgcagagaagaattttggcttggactggataacctgagcaaaatcacagcc caagggcagtatgagctccgggtggacctacaagaccatggggagtctgcctatgctgtg tatgacagattcagtgttggagatgccaagagtcgatacaagctgaaggtagaaggatac agtggaacagcaggtgactccatgaactatcacaatggtagatccttctccacctatgac aaggacacagactcagccatcaccaactgtgccctgtcctacaaaggagctttctggtat aagaactgtcatcgtgtcaacctgatgggcagatatggggacaataaccacagtcagggc gttaactggttccattggaagggtcacgagtactcaatccagtttgctgaaatgaaactg agacccagcaacttccgaaatctggaaggcaggcgtaagcgggcgtaa

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