KEGG   Mus caroli (Ryukyu mouse): 110292958
Entry
110292958         CDS       T05910                                 
Name
(RefSeq) calreticulin-like isoform X1
  KO
K08057  calreticulin
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04141  Protein processing in endoplasmic reticulum
mcal04145  Phagosome
mcal04148  Efferocytosis
mcal04612  Antigen processing and presentation
mcal05142  Chagas disease
mcal05163  Human cytomegalovirus infection
mcal05166  Human T-cell leukemia virus 1 infection
mcal05168  Herpes simplex virus 1 infection
mcal05169  Epstein-Barr virus infection
mcal05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110292958
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110292958
   04148 Efferocytosis
    110292958
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    110292958
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    110292958
   05170 Human immunodeficiency virus 1 infection
    110292958
   05168 Herpes simplex virus 1 infection
    110292958
   05163 Human cytomegalovirus infection
    110292958
   05169 Epstein-Barr virus infection
    110292958
  09174 Infectious disease: parasitic
   05142 Chagas disease
    110292958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:mcal03110]
    110292958
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:mcal04091]
    110292958
Chaperones and folding catalysts [BR:mcal03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   110292958
Lectins [BR:mcal04091]
 L-type lectins
  110292958
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 110292958
NCBI-ProteinID: XP_021016310
Ensembl: MGP_CAROLIEiJ_G0026281
UniProt: A0A6P5PFD7
LinkDB
Position
4:101327774..101364048
AA seq 439 aa
MASLSLLPLLLLTTCTVRTQGKRRQVYFREEFEDGDGWTKRWVQSKHQSDYGQFQLASGK
FYQDKERDKGLQTTEDAKFYALSTRFKPFSNENETLVVQFSVKHEQGIDCGGGYVKLFPA
ALNQEDMHSESQYYIMFGPDICGFGNNRLQVILSHKGKYHENNKTLKCRINKDTHLYTLI
LRPNATYEVKIDNQKVTSGGLEDDWDFLPPKKIKDPYARKPRKWDERQQIEDPDDKKPED
WEDSEFIPDPDAKKPDDWNEAMDGVWEGPLIPNVKYMGEWKPRIIDNPNYQGEWIHPEID
NPKYRPDPTIGHYHNISVLGLDLWQVKSGSIFDNFLLTNDEEFAEEVGNMTWGLRKDVEQ
QWRELYEEMEKQKEAEETKKKREKERARQEDVWGLDEEDEEDAEEDDEEEAEGSPKQEGS
AERASLDQKEAHIDQKDEL
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggcgagcctgtcgctgctgcctctgctgctgctgaccacctgcaccgtcaggacacag
gggaagagacggcaagtctacttccgggaggagttcgaagatggggatggatggacaaaa
cggtgggtacaatctaagcatcagtcagattacggccaattccagctcgcctcgggaaag
ttttatcaagacaaagagagagataaaggtctccagaccacagaagatgccaagttctac
gccctttctaccaggtttaagccattcagcaatgagaatgagaccttggtggttcagttt
tcagtaaaacacgagcaaggcatcgattgcggcggtggctacgtgaaactctttcctgcc
gcactgaaccaggaggacatgcactcagaatcccagtattacatcatgttcggcccggac
atctgtggctttggcaacaacagactacaggtcatcctttctcacaaagggaaataccat
gagaacaacaagaccctcaagtgcaggattaataaagacactcacctgtacactctgatc
cttcgccctaatgctacttatgaggttaaaattgacaaccagaaggtgacaagtggagga
ctggaagatgactgggacttcttgcctcccaagaaaataaaagacccctacgccaggaaa
ccaaggaaatgggatgaacgacaacagatagaggatcctgacgataagaaacctgaggac
tgggaggactctgaattcatcccagacccggatgccaagaagccagatgactggaatgag
gcgatggatggagtgtgggaagggcccctgataccaaacgtcaagtacatgggagaatgg
aaacctcggatcattgacaatcccaattaccagggcgagtggattcacccagagatagac
aaccccaaatacaggcctgaccccaccattggtcactatcacaacatcagtgtccttggt
ctggatctgtggcaggtgaaatcaggcagcatctttgacaatttccttctaacgaatgat
gaagagtttgctgaagaggttggaaatatgacctggggattaagaaaggatgtggagcag
cagtggagagagctgtacgaggaaatggagaaacagaaggaggcggaggagaccaagaag
aagagggaaaaggagagagccaggcaagaggacgtctggggactggatgaggaggacgag
gaggacgctgaagaggacgacgaggaggaagcagagggaagtcccaagcaggaaggcagt
gcagagagggcgtctctggaccagaaggaagcccacattgatcagaaggatgaactgtaa

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