KEGG   Mus caroli (Ryukyu mouse): 110292973
Entry
110292973         CDS       T05910                                 
Symbol
Sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04514  Cell adhesion molecules
mcal04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110292973 (Sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110292973 (Sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:mcal00535]
    110292973 (Sdc3)
Proteoglycans [BR:mcal00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   110292973 (Sdc3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 110292973
NCBI-ProteinID: XP_021016336
Ensembl: MGP_CAROLIEiJ_G0026550
UniProt: A0A6P5PLF6
LinkDB
Position
4:120431397..120464607
AA seq 442 aa
MKPGPPRRGTAQGQRVDTATHAPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLE
GSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDMALAAPTAPAMLPTTVIQPV
DTPFEELLSEHPSPEPVTSPPLVTEVTEVVEEPSQKATTISTTTSTTTATTTGAPTMATA
PATAATTAPSTPEAPPATATVADVRTTGIQGMLPLPLTTAATVKVTTPAAPSPPTTVATL
DTEAPTPRLVNTATSRPRALPRPVTTQEPDVAERSTLPLGTTAPGPTEVAQTPTPESLLT
TIQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAATKPSPPLGTLPKGARPGPGL
HDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaagcccgggccgccgcgccgcgggaccgcacaggggcagcgcgtggacaccgccacc
catgcgcccggggcccgcgggctgttgctgccaccgctgctgctgctgctgctggccggc
cgcgccgcgggggctcaacgctggcgcaatgagaacttcgagaggccggtggatcttgag
ggctcaggggatgacgactcctttcctgatgatgaactagacgacctctactcggggtca
ggctctggctacttcgagcaggagtccggccttgagacggccatgcggttcatccctgat
atggccctggctgcgcccactgcacctgccatgctacccacgaccgttatccagccagtg
gacaccccgtttgaggaactcctttctgagcaccccagccctgaaccagtcaccagtccc
ccactggtgacagaggtgacagaggtcgtagaagagcccagccagaaagctaccaccatc
tctaccaccacatctaccaccacggccaccaccacaggggccccaactatggccacagca
cctgccacagcagccaccactgcccctagcactccagaggcgccccctgccacggctacc
gtggctgatgtaaggaccaccggcatacaggggatgctgcctcttcccctgaccacagct
gccacagtcaaggtcactaccccagcagcaccctcaccgcccactactgtggctaccttg
gacacagaggccccgacacctaggctggtcaacacagctacctcgcggccacgagccctt
cctcggccagtcaccacccaggagcctgatgttgctgagaggagtaccctgccgttgggg
accacggctcctggacccacagaggtggctcagaccccaactccagagtcccttctgacc
accatccaggatgagccagaggtgccagtaagtggggggcccagcggagactttgagctt
caagaagagaccacgcagccagacacggccaatgaggtggtggctgtggaaggagccgca
accaagccgtcacctccactggggacactgcccaagggtgcccgcccaggccctggcctc
cacgacaatgccatcgattcgggcagctcggccgcccagctccctcagaagagcatactg
gagcggaaggaggtgctcgtagccgtgatcgtgggcggggtggtgggtgccctcttcgct
gccttcctggtcacgctgctcatctaccgcatgaagaagaaggacgaaggcagctacacc
ttggaagagcccaagcaggcaagcgtcacgtaccagaagcctgacaagcaggaggagttc
tacgcttag

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