Mus caroli (Ryukyu mouse): 110292973
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Entry
110292973 CDS
T05910
Symbol
Sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04514
Cell adhesion molecules
mcal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110292973 (Sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110292973 (Sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcal00535
]
110292973 (Sdc3)
Proteoglycans [BR:
mcal00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
110292973 (Sdc3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
110292973
NCBI-ProteinID:
XP_021016336
Ensembl:
MGP_CAROLIEiJ_G0026550
UniProt:
A0A6P5PLF6
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All DBs
Position
4:120431397..120464607
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AA seq
442 aa
AA seq
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MKPGPPRRGTAQGQRVDTATHAPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLE
GSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDMALAAPTAPAMLPTTVIQPV
DTPFEELLSEHPSPEPVTSPPLVTEVTEVVEEPSQKATTISTTTSTTTATTTGAPTMATA
PATAATTAPSTPEAPPATATVADVRTTGIQGMLPLPLTTAATVKVTTPAAPSPPTTVATL
DTEAPTPRLVNTATSRPRALPRPVTTQEPDVAERSTLPLGTTAPGPTEVAQTPTPESLLT
TIQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAATKPSPPLGTLPKGARPGPGL
HDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgggccgccgcgccgcgggaccgcacaggggcagcgcgtggacaccgccacc
catgcgcccggggcccgcgggctgttgctgccaccgctgctgctgctgctgctggccggc
cgcgccgcgggggctcaacgctggcgcaatgagaacttcgagaggccggtggatcttgag
ggctcaggggatgacgactcctttcctgatgatgaactagacgacctctactcggggtca
ggctctggctacttcgagcaggagtccggccttgagacggccatgcggttcatccctgat
atggccctggctgcgcccactgcacctgccatgctacccacgaccgttatccagccagtg
gacaccccgtttgaggaactcctttctgagcaccccagccctgaaccagtcaccagtccc
ccactggtgacagaggtgacagaggtcgtagaagagcccagccagaaagctaccaccatc
tctaccaccacatctaccaccacggccaccaccacaggggccccaactatggccacagca
cctgccacagcagccaccactgcccctagcactccagaggcgccccctgccacggctacc
gtggctgatgtaaggaccaccggcatacaggggatgctgcctcttcccctgaccacagct
gccacagtcaaggtcactaccccagcagcaccctcaccgcccactactgtggctaccttg
gacacagaggccccgacacctaggctggtcaacacagctacctcgcggccacgagccctt
cctcggccagtcaccacccaggagcctgatgttgctgagaggagtaccctgccgttgggg
accacggctcctggacccacagaggtggctcagaccccaactccagagtcccttctgacc
accatccaggatgagccagaggtgccagtaagtggggggcccagcggagactttgagctt
caagaagagaccacgcagccagacacggccaatgaggtggtggctgtggaaggagccgca
accaagccgtcacctccactggggacactgcccaagggtgcccgcccaggccctggcctc
cacgacaatgccatcgattcgggcagctcggccgcccagctccctcagaagagcatactg
gagcggaaggaggtgctcgtagccgtgatcgtgggcggggtggtgggtgccctcttcgct
gccttcctggtcacgctgctcatctaccgcatgaagaagaaggacgaaggcagctacacc
ttggaagagcccaagcaggcaagcgtcacgtaccagaagcctgacaagcaggaggagttc
tacgcttag
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