KEGG   Mus caroli (Ryukyu mouse): 110293038
Entry
110293038         CDS       T05910                                 
Symbol
Nbn
Name
(RefSeq) nibrin isoform X1
  KO
K10867  nibrin
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03440  Homologous recombination
mcal04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110293038 (Nbn)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    110293038 (Nbn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcal03032]
    110293038 (Nbn)
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110293038 (Nbn)
DNA replication proteins [BR:mcal03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    110293038 (Nbn)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     110293038 (Nbn)
    BRCA1-C complex
     110293038 (Nbn)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl PTCB-BRCT
Other DBs
NCBI-GeneID: 110293038
NCBI-ProteinID: XP_021016445
Ensembl: MGP_CAROLIEiJ_G0025828
UniProt: A0A6P5PRN5
LinkDB
Position
4:11695538..11731656
AA seq 750 aa
MWKLLPAAGAAPGEPYRLLAGVEYVVGRKNCGILIENDQSISRNHAVLTVNFPVTSLSQT
DEIPTLTIKDNSKYGTFVNEEKMQPGLSCTLRTGDRVTFGVFESKFRVEYEPLVVCSSCL
DVSGKTVLNQAILQLGGLMANNWTEACTHLVMSAVKVTIKTICALICGRPIIKPEYFSEF
LKAVQSKKQPPEIESFYPPIDEPAIGSKSVDLSGRHERKQIFKGKTFVFLNAKQHKKLSS
AVAFGGGEARLMAEEDEEEQSFFSAPGTCVVDVGITNTQLIIPDSQKKWIHLIMDILQRN
GLRPIPEAEIGLAVIFMTTENYCNPQSQPCTELKTTTPGPSLSQVLSANGKIIPSAPMNM
TTYVADTESEPADTCMPLSERPEEVKIPGLEQSSRKLSEETFNIKEAPKPSSKANNLASN
TLVRGKSPSYQLSPMKFPVASKNKDWTSQQQQNSIKNYFQPCARKRRERDEDNPELSSCK
SSRMELSCSLLEQTQPAGPSLWKSKEHQSQNETLDREADTSSVGGMDIKLNRKSPDRKPF
PTETLRPRKRKDVDLATEEEVLEELLRSTKPELAVQVKVEKQEADVTIRKKPRMDAERNR
PLNGGSEPESNSAPQEDEREKKDELQTESWSTKQEIANRDDLQDSSEELPRKLLLTEFRS
LVVSNHTSRNLCINDCGPLKNFKKFKKATFPGAGKLPHIIGGSDLVGHHARRNTELEEWL
KHEMEVQKQQAKEESLADDLFRYNPNVRRR
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgtggaagctgctcccggccgccggtgcggctccaggagaaccataccgacttttggct
ggcgtggagtacgttgttgggaggaaaaactgtggcattctgattgaaaatgatcagtca
atcagtcgaaatcatgctgtcttaacagtaaactttcctgtaaccagtttgagtcaaaca
gatgaaattcctacattaacaataaaagataactctaagtatggaacctttgttaatgaa
gaaaaaatgcagcctggtctttcctgcactttgaggacaggagatagagttacctttggc
gtgtttgaaagtaaattcagagtagaatacgagcccttggttgtttgttcttcttgttta
gatgtctctgggaaaactgttttaaatcaagctattttacagcttggaggacttatggca
aacaactggacggaagcatgtacccacctggtcatgtcggcagttaaagtcaccattaaa
actatatgtgcactcatttgtggacgtccaattataaaaccagaatacttttctgaattt
cttaaagcagttcaatctaagaaacagcctccagaaattgaaagtttttacccacccatt
gatgaaccagctattggaagtaaaagtgttgatctgtcaggacgacatgaaagaaaacag
atcttcaaaggaaaaacatttgtatttttaaatgccaagcagcacaagaaactcagctcg
gcagttgctttcggaggtggagaagccaggctgatggcagaagaagacgaagaggaacag
agcttcttttcagctcccggaacctgtgttgttgatgtaggaataacaaatacacagctc
ataattccagactcccagaaaaaatggattcatttgataatggatatacttcaaaggaat
ggtctcagacctattcctgaagcggagattggattggctgttatttttatgactacagag
aattactgtaatccgcagagccagccttgtacagaattaaagacaacgactccaggacca
agcctttcccaagtcctgtcagccaatggaaaaataatcccaagtgctccaatgaatatg
accacatacgtagctgacacagaatcagaaccagcagatacatgtatgcctttgagtgaa
agaccagaagaagtaaagatccctggactggaacaaagctctaggaagctttcagaagaa
acattcaatataaaggaggcccctaaaccaagctccaaagctaataacctagcatcaaat
acgctggttaggggaaagtccccgagctatcagctttctccaatgaaatttcctgttgca
agtaaaaataaggattggacttctcagcagcagcagaactccatcaaaaactacttccag
ccatgcgccagaaaaagaagggaaagggatgaagacaatccagaactgtcctcatgcaaa
tcatccaggatggagctgtcctgttctcttttagaacaaacacaacctgccggaccctca
ctgtggaaaagcaaggagcatcagtctcagaatgagaccctggacagggaagccgacacc
tcatctgtgggtgggatggacataaaactcaacaggaagagtcctgacaggaaaccattt
cccacagaaactcttagaccaagaaaaagaaaagatgttgatttagctacagaagaggaa
gtattggaagagttactgaggagtacaaagccagagttggcagttcaagtgaaggttgaa
aagcaggaggcagatgtcaccatcagaaaaaagccaaggatggatgcagagaggaatcgg
cccctgaatggtggatcagagccggaaagcaacagcgctcctcaagaagatgaaagagaa
aagaaagatgaacttcagacagagtcgtggtcaacaaaacaggaaatagctaatcgtgat
gatcttcaggacagcagtgaggagctgccacggaaactgctgctgactgaatttaggtca
ttggtcgtcagtaaccacacctcgagaaatctgtgcataaatgattgtggtccactgaag
aatttcaagaaattcaagaaggctacatttcctggagcaggaaagcttccacacatcatc
ggaggatcagacttagtcggtcaccatgctcgaaggaataccgaattagaagaatggttg
aaacacgaaatggaggtacagaaacaacaagcaaaggaggaatctcttgctgatgatctg
tttagatataatcctaatgtaagaagaagataa

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