Mus caroli (Ryukyu mouse): 110293038
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Entry
110293038 CDS
T05910
Symbol
Nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03440
Homologous recombination
mcal04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110293038 (Nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
110293038 (Nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcal03032
]
110293038 (Nbn)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110293038 (Nbn)
DNA replication proteins [BR:
mcal03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110293038 (Nbn)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110293038 (Nbn)
BRCA1-C complex
110293038 (Nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
RTT107_BRCT_5
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
110293038
NCBI-ProteinID:
XP_021016445
Ensembl:
MGP_CAROLIEiJ_G0025828
UniProt:
A0A6P5PRN5
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Position
4:11695538..11731656
Genome browser
AA seq
750 aa
AA seq
DB search
MWKLLPAAGAAPGEPYRLLAGVEYVVGRKNCGILIENDQSISRNHAVLTVNFPVTSLSQT
DEIPTLTIKDNSKYGTFVNEEKMQPGLSCTLRTGDRVTFGVFESKFRVEYEPLVVCSSCL
DVSGKTVLNQAILQLGGLMANNWTEACTHLVMSAVKVTIKTICALICGRPIIKPEYFSEF
LKAVQSKKQPPEIESFYPPIDEPAIGSKSVDLSGRHERKQIFKGKTFVFLNAKQHKKLSS
AVAFGGGEARLMAEEDEEEQSFFSAPGTCVVDVGITNTQLIIPDSQKKWIHLIMDILQRN
GLRPIPEAEIGLAVIFMTTENYCNPQSQPCTELKTTTPGPSLSQVLSANGKIIPSAPMNM
TTYVADTESEPADTCMPLSERPEEVKIPGLEQSSRKLSEETFNIKEAPKPSSKANNLASN
TLVRGKSPSYQLSPMKFPVASKNKDWTSQQQQNSIKNYFQPCARKRRERDEDNPELSSCK
SSRMELSCSLLEQTQPAGPSLWKSKEHQSQNETLDREADTSSVGGMDIKLNRKSPDRKPF
PTETLRPRKRKDVDLATEEEVLEELLRSTKPELAVQVKVEKQEADVTIRKKPRMDAERNR
PLNGGSEPESNSAPQEDEREKKDELQTESWSTKQEIANRDDLQDSSEELPRKLLLTEFRS
LVVSNHTSRNLCINDCGPLKNFKKFKKATFPGAGKLPHIIGGSDLVGHHARRNTELEEWL
KHEMEVQKQQAKEESLADDLFRYNPNVRRR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctgctcccggccgccggtgcggctccaggagaaccataccgacttttggct
ggcgtggagtacgttgttgggaggaaaaactgtggcattctgattgaaaatgatcagtca
atcagtcgaaatcatgctgtcttaacagtaaactttcctgtaaccagtttgagtcaaaca
gatgaaattcctacattaacaataaaagataactctaagtatggaacctttgttaatgaa
gaaaaaatgcagcctggtctttcctgcactttgaggacaggagatagagttacctttggc
gtgtttgaaagtaaattcagagtagaatacgagcccttggttgtttgttcttcttgttta
gatgtctctgggaaaactgttttaaatcaagctattttacagcttggaggacttatggca
aacaactggacggaagcatgtacccacctggtcatgtcggcagttaaagtcaccattaaa
actatatgtgcactcatttgtggacgtccaattataaaaccagaatacttttctgaattt
cttaaagcagttcaatctaagaaacagcctccagaaattgaaagtttttacccacccatt
gatgaaccagctattggaagtaaaagtgttgatctgtcaggacgacatgaaagaaaacag
atcttcaaaggaaaaacatttgtatttttaaatgccaagcagcacaagaaactcagctcg
gcagttgctttcggaggtggagaagccaggctgatggcagaagaagacgaagaggaacag
agcttcttttcagctcccggaacctgtgttgttgatgtaggaataacaaatacacagctc
ataattccagactcccagaaaaaatggattcatttgataatggatatacttcaaaggaat
ggtctcagacctattcctgaagcggagattggattggctgttatttttatgactacagag
aattactgtaatccgcagagccagccttgtacagaattaaagacaacgactccaggacca
agcctttcccaagtcctgtcagccaatggaaaaataatcccaagtgctccaatgaatatg
accacatacgtagctgacacagaatcagaaccagcagatacatgtatgcctttgagtgaa
agaccagaagaagtaaagatccctggactggaacaaagctctaggaagctttcagaagaa
acattcaatataaaggaggcccctaaaccaagctccaaagctaataacctagcatcaaat
acgctggttaggggaaagtccccgagctatcagctttctccaatgaaatttcctgttgca
agtaaaaataaggattggacttctcagcagcagcagaactccatcaaaaactacttccag
ccatgcgccagaaaaagaagggaaagggatgaagacaatccagaactgtcctcatgcaaa
tcatccaggatggagctgtcctgttctcttttagaacaaacacaacctgccggaccctca
ctgtggaaaagcaaggagcatcagtctcagaatgagaccctggacagggaagccgacacc
tcatctgtgggtgggatggacataaaactcaacaggaagagtcctgacaggaaaccattt
cccacagaaactcttagaccaagaaaaagaaaagatgttgatttagctacagaagaggaa
gtattggaagagttactgaggagtacaaagccagagttggcagttcaagtgaaggttgaa
aagcaggaggcagatgtcaccatcagaaaaaagccaaggatggatgcagagaggaatcgg
cccctgaatggtggatcagagccggaaagcaacagcgctcctcaagaagatgaaagagaa
aagaaagatgaacttcagacagagtcgtggtcaacaaaacaggaaatagctaatcgtgat
gatcttcaggacagcagtgaggagctgccacggaaactgctgctgactgaatttaggtca
ttggtcgtcagtaaccacacctcgagaaatctgtgcataaatgattgtggtccactgaag
aatttcaagaaattcaagaaggctacatttcctggagcaggaaagcttccacacatcatc
ggaggatcagacttagtcggtcaccatgctcgaaggaataccgaattagaagaatggttg
aaacacgaaatggaggtacagaaacaacaagcaaaggaggaatctcttgctgatgatctg
tttagatataatcctaatgtaagaagaagataa
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