Mus caroli (Ryukyu mouse): 110293216
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Entry
110293216 CDS
T05910
Symbol
Cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
110293216 (Cdh17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110293216 (Cdh17)
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Major cadherins
110293216 (Cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
110293216
NCBI-ProteinID:
XP_021016727
Ensembl:
MGP_CAROLIEiJ_G0025813
UniProt:
A0A6P5PGE6
LinkDB
All DBs
Position
4:7824026..7886541
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AA seq
827 aa
AA seq
DB search
MVSAQLHFLCLLTLYLTCGYGQEGKFSGPLKPMTFSIFEGQEPSQIIFQFKTNPPAVNFE
LTGETDGIFKIEKDGLLYHTRALDRETRAVHHLQLAALDSRGAIVDGPVPIIIEVKDIND
NRPTFLQSKYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLFYQIVIQLPKINNDMYFQ
INNKTGAISLTPEGSQELDPVKNPSYSLVVSVKDMGGQNENSFSDTASVDISVRENIWKA
PEPVEIRENLTDPHPIKITQVQWNDPGAQYSLVNKEKLSPFPFSIDQEGNIYVTQPLDRE
EKNSHVFFATAKDENGKPLAYPLEIYVKVIDINDNPPTCLSPVTVFEVQENEPLGNSIGN
FVAHDMDEANSINSILKYKLVDQTPKVPSDGLFLIGEYEGKVQLSKQSLKKQDSPQYNLT
VEVSDIDFKTLCSVQVNVIDINDQIPIFETSNYGSKTLSEDTAIGSTILIIQATDADEPF
TGSSKILYKIVQGDTEGRLEVVTDPMTNAGYVKIKKPLDFETQPVSSIVFKAENPEPLVE
GIEYNASSFASFELIVTDVNEVPVFPRRIFQANVSEDAAVGSRVGNVTARDPEGLAVSYS
LKGNTRGWLKIDSVTGEIFSAAPLDRETESVYRVQVVATEVGGSSLSSTADFHLVLTDVN
DNPPRLAKDYTGLFFCHPLSAPGSLIFEATDDDQQSLRRPKFTFALGREGLQSDWEVSKI
NGTHARLSTRHTRFEEQVYNIPIRINDGGQPPMEGIVSLPVTFCRCVEGSCFRPAGRQDG
IPTVGMAVGILLTTFLVIGIILAVVFIRIRKDKVENPQSPENKPLRS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgcccagcttcacttcctgtgtcttctcacactttatttgacctgtggatat
ggccaagaagggaagttcagcggtcccctgaagcccatgacattctctatttttgaaggc
caagaaccgagtcaaatcatattccagtttaagaccaaccctccagctgtgaatttcgag
ctaacgggagagacagatggtatatttaagatagaaaaggatggacttctgtatcacaca
agagccctggacagagaaacaagagcggttcatcatctgcagcttgcagccttggattct
cgtggagctatagtggacggtccagtccccatcatcatagaagtcaaggacatcaatgac
aacagacccacgtttctccagtcaaaatatgaaggctccgtgaggcagaactctcgccca
ggaaagcctttcatgtatgtcaatgccacagatctggatgatccggctactcccaatggc
cagcttttttatcaaattgtcatccaacttcccaaaatcaacaatgatatgtactttcaa
atcaacaacaaaacaggggcaatatcgcttaccccagaaggatcccaggaattggatcca
gtgaagaatccttcctacagcctggtggtctcggtgaaggacatggggggccagaatgag
aattccttcagtgataccgcatctgtagatatttctgttagagagaacatctggaaagca
ccagaacctgtggagattagagaaaacttgactgatcctcaccccatcaaaatcactcag
gtgcagtggaatgacccaggggcccagtattccttagtcaacaaggagaagctgtcgccg
ttcccattctcgatcgaccaagaaggaaatatttatgtgactcagcccttggaccgggag
gaaaagaactcacatgttttctttgcaactgccaaggatgagaatggaaaaccacttgca
tatccactggaaatttatgtgaaagttattgacattaatgacaacccaccaacatgtctg
tctccagtgactgtatttgaagtccaggagaatgaaccattgggtaacagcattgggaac
tttgtggcccatgatatggacgaagctaacagcatcaacagtattttgaaatacaaactt
gtagaccaaacacccaaagttccctcagatggactttttctcattggtgaatatgaggga
aaggttcagttaagtaaacagtccttgaagaagcaagacagtcctcagtacaacttaact
gtagaggtgtctgacatagatttcaagactctctgttctgttcaagtcaacgttattgat
atcaatgatcagattcccatctttgaaacatcaaattatggaagcaagactctgtctgaa
gacaccgccatcggatccacaatcctaatcatccaagctacagatgctgatgagcccttt
acagggagctctaaaatcctgtacaagattgtacagggagacacggaggggagactagaa
gttgtcacagatcccatgaccaatgcaggatatgtcaagatcaaaaagcctcttgatttt
gaaactcaaccagttagcagcattgtgttcaaagcagaaaatcctgagccactggtggaa
ggcatagagtacaatgctagttcttttgcctccttcgagctgattgtgacagatgtgaat
gaagtgcctgtgttcccccggcgaatattccaagcaaacgtcagcgaggatgctgctgtg
ggcagtagagtgggcaacgtgactgccagggatcctgaaggcctggctgtgagttattca
ctgaaaggcaatacgagaggctggcttaaaatcgactctgtcactggtgagatatttagc
gctgctccgctggatagggaaacagaaagtgtgtatcgagtacaagtggtggccactgaa
gtaggtgggtcctctctgagttctacggcagatttccacctggtcctcacagatgtgaat
gacaacccccctcgcctagctaaggactacacaggcttgttcttctgccatcccctcagt
gcccctgggagcctcatctttgaggccactgatgatgaccagcagtcacttcggaggccc
aagtttacattcgcccttggcagagaaggcttacaaagtgactgggaagtttcaaaaatc
aatggtacacatgctagactctccaccaggcacacacgctttgaggaacaagtttataac
attccaatccgcatcaatgatggggggcagccacccatggaagggattgtctccttacca
gttactttctgccggtgtgtggaaggaagctgtttccggccagcaggcagacaggatggg
atacccactgtgggcatggcagttggtatacttctgaccacatttctggtcattggtata
attttagcagttgtcttcatccgcataaggaaagataaagttgaaaatccgcagtcccct
gagaataaacctctgagaagctga
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