Mus caroli (Ryukyu mouse): 110293354
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Entry
110293354 CDS
T05910
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110293354 (Taf1a)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110293354 (Taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
NEW1_HB
Motif
Other DBs
NCBI-GeneID:
110293354
NCBI-ProteinID:
XP_021016865
Ensembl:
MGP_CAROLIEiJ_G0015011
UniProt:
A0A6P5PLC9
LinkDB
All DBs
Position
1:173334129..173354728
Genome browser
AA seq
453 aa
AA seq
DB search
MISDFDEELTKLAVAEDNQETSVVSKTGMHFPWLHKHVEAVVTGGKKKKDFAQTTSACLS
FIQEALLKHQWQQAAEYMHSYLQTLEDSDTDKRQAAPEIIWKLGSEILFYHPKSNVETFN
SFADRMKNIGVLNYLKISLQHALYLLHHGMLEDANRNLSKAETWRYGEKSSSQEVLLNLV
QAYKGLLEYYTWSRKKMELSKLDEDDYAYAAKTRNMLSQSCKMSTNICALVKTPGVWDPF
VKSYVEMLEFFGDQDGAREMLTNYAYDEKFPSNPNAHVYLYEFLKREKAPRAKLISVLKI
LHEIVPSHTLMLEFHTLLRKSETKEHQKLGLTVLFEVLDFAGCNKNITAWKYLAKYLKQI
LMESHQDWVEEEWKSRRNWWPAFHFSFFWAKSDWKADTDLACEKAFVAGILLGKGCKYFR
YILKQDHETLKKKIKRMKKSVKKYTIVNPGVHT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgattagtgattttgatgaagaattgacaaagctggctgtggctgaggataaccaagaa
acgtcggtggtctctaagacgggaatgcatttcccatggcttcacaagcacgttgaagct
gtagtgactggagggaagaagaagaaggattttgctcagacgacaagtgcttgtttaagc
tttatccaggaagccctgctgaagcaccagtggcagcaagctgcagagtatatgcacagt
tacctgcagaccctggaggactcagacaccgacaagagacaggctgcccctgagatcatt
tggaagcttggaagtgaaattctattttaccaccccaaaagcaatgtggagacttttaat
agcttcgctgaccggatgaaaaatattggtgtcttgaattatttaaagatctccttacag
cacgccttgtatcttttacatcatggaatgcttgaggatgcgaacaggaacctaagcaag
gcagagacgtggaggtatggagaaaagtcgtcttctcaggaagtgttgctcaaccttgtt
caggcctacaaagggcttctagagtactacacttggtccagaaagaagatggagttgtca
aagcttgatgaggatgattacgcttatgccgccaaaacccgaaacatgctcagccagagc
tgcaagatgtctacaaatatctgtgcactggtcaaaacgcccggggtctgggaccctttt
gtgaagagttatgtggagatgctggagttctttggtgatcaagatggagcccgagagatg
ctcaccaattatgcatatgatgagaagttcccgtcgaaccccaatgcccacgtctactta
tacgagtttctcaagagagagaaggcaccgagggcgaagctcataagtgttcttaagatt
ttacatgagattgtgccatcccatacactgatgttagaattccatacattgcttagaaaa
tcagagacaaaagaacaccagaaactgggcttgactgtgttatttgaagtcctggacttc
gctggatgcaataagaacataacggcctggaaatacttggcaaagtatctgaagcagata
ttaatggaaagccatcaagattgggttgaagaagagtggaagtctaggaggaactggtgg
ccggcttttcacttcagcttcttttgggcgaagagtgactggaaggcagacactgacttg
gcttgtgagaaagcttttgtggcagggatccttttaggaaaaggttgtaaatattttcgg
tatattttaaaacaagatcatgaaaccttgaagaagaaaatcaagcggatgaagaagtct
gtgaaaaaatacactattgtaaatccaggtgttcacacctag
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