Mus caroli (Ryukyu mouse): 110293513
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Entry
110293513 CDS
T05910
Symbol
Zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40 isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110293513 (Zbtb40)
04121 Ubiquitin system [BR:
mcal04121
]
110293513 (Zbtb40)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
110293513 (Zbtb40)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
110293513 (Zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_PRDM15
XAF1_C
zf-C2HC_2
zf-C2H2_11
ARM_TT21_2nd
MCR_C
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
110293513
NCBI-ProteinID:
XP_029332242
Ensembl:
MGP_CAROLIEiJ_G0026672
UniProt:
A0A6P7QV70
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Position
4:complement(126664186..126734182)
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AA seq
1258 aa
AA seq
DB search
MELPNYSQQLLLQLYALCKEQRFCDCTISVGNIYFRAHKPVLAAASLLFKTLLDSTDAIS
IDASVVSPEEFALLLEMAYTGKLPVGKHNFSKIISLADSLQMFDVAVSCKNLLTNLVNCS
VQGQVVRDVSVLSSEAGSKESEKPQVEALSSEGAGEPSSSPEVSAVPAGPEKAKTQDVIN
IATQEINADPPVAQEVQVAAEITGETPHTAEVCSPSPVGQIPSETKEANTEAECETKQDQ
LTLLLEHESVFSDAALLTPDTLRRLAGCSEIEGPQKETIMECLTSEGGSSAFQRILDKVH
KGSLDVQVALSLVRLYQESTPAEKVSQIQPEGSSGEGKTLSVLLLEHKEDLIQCVTQLRP
IVEFLETAKEEFLPDSEKRVIQSCCEGRTPKETIENLLHRVTEEKTLPAKSLVKLLQAVR
TAFPNLDHLLDNLQKGAGSAGATGLARVSCETEWTEEPRPVCIPADRVDGSSPNPDAYGA
ELLRKYHENLSEILIDNQVLLKVISRMKSLAPGDREVMQTLVKQDSGSGGFSSLMLAALE
RQTLSATAIWQLLLAVQEPETCPLNLLLEEVGKEAGAGAFFRVVTAPESTVLEAILRHSK
LLREAIQQTAGCERLSSEEEHLAEIVQEMLSISSETVSPEASLRAVLSKAMEKSVSASVV
CHLLCSIHKSFPGLQPLMQELAHVGFLTKESGEERWKVTDGLHPGAKDKAEEAAKATRED
CQANEQKEQGEPGPVPEQQEKDTSASPDSAKKSFVCKACDKSFHFYCRLKVHMKRCRVAK
SRQVQSEEGSETKGSEKGLEKQQPDARGTGGEPDAPKKKKKRLPVTCDLCGREFAHASGM
QYHKLTEHFDEKPFSCEECGAKFAANSTLKNHLRLHTGDRPFMCKHCLMTFTQASALAYH
TKKKHSEGKMYACQYCDAVFAQSIELSRHVRTHTGDKPYVCRDCGKGFRQANGLSIHLHT
FHTDIEDPYDCKKCRMSFSTLQDHRKHIHEVHAKEYHPCPTCGKIFSAPSMLERHMVTHV
GGKPFSCGICNKAYQQLSGLWYHNRTHHPDVFAAQNHRSPKFSSLQCSSCDKTFSNTVEH
KKHIKTEHTDVKFHECDQCKELFPTPALLQVHVKCQHSGSQPFRCLYCAATFRFPGALQH
HVTTEHFKQSESTFPCELCGELFTSQAQLDSHLESEHPKVAGTESQAAASRMVQVIRAPE
PAAPAEQVITLEETQLAGSQVFVTLPDSQTSQNSSELVAVTVEDLLDGTVTLICGEAK
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggaactccccaactacagccagcagctgcttctgcagctctacgccctgtgcaaggag
cagcggttctgtgattgcaccatttccgtcggcaacatctacttcagggcccacaagcca
gtcctggcagcagccagcctcctgttcaaaaccctgctggacagcacagacgccatctcc
atcgatgcatcggtggtgagccctgaagagtttgccctcttgctagaaatggcatacacc
ggcaagctacctgtgggcaagcacaacttctccaagatcatctccttagcagatagcctg
cagatgtttgacgtggccgtcagttgtaaaaaccttctgaccaacctggtaaactgctct
gtccaggggcaggtggtaagggatgtctcagtgctgtcctcagaggcagggagcaaggag
tcagagaagccacaagtagaagccctctcctctgaaggtgctggggagccctcttcttct
ccggaagtttctgccgtgccagcgggccctgagaaagccaagacccaggacgtaatcaac
atagctacccaagagataaatgcagaccctcccgttgcccaagaggttcaggtggctgca
gagatcacaggggagactcctcacacagctgaggtttgttccccttcccctgttggacaa
atcccaagtgagacgaaggaagccaatacagaagcagagtgtgagacaaagcaggaccaa
ctgactctcctgctagagcatgaaagcgtcttctcagatgcagccttgctcaccccagac
accctgagaagactggcaggatgctcagagatcgaagggcctcagaaggagaccataatg
gaatgtctcacgagcgaaggaggcagttcagcgttccagagaattctggacaaagtgcac
aaggggagcctggatgtgcaggtggctctgtctctggtgagactataccaggagtctaca
cctgcagagaaagtgtctcagattcagccagaagggagctcaggagagggaaagaccttg
tctgttctgttactggaacacaaagaggacctgatccagtgtgtaacacagctcagacct
attgtggagttcctggaaacagccaaggaggaattcctgccagattccgaaaaaagggtg
attcagagctgctgtgagggcagaacacccaaggagacgatagagaatttgttgcacaga
gtgactgaagagaagaccctgcctgccaaaagtctggtaaaactcctccaggctgtgagg
acagcgttcccaaacctggaccacctgctggacaatttgcagaaaggagcaggatcagcc
ggcgccacaggcctggccagagtctcctgtgagacggaatggacagaggagccccggccg
gtgtgcattccagcagaccgagtggatggatcctcccctaaccctgatgcttacggagct
gagctgttgagaaagtaccatgagaacctgtctgagattctcatagacaaccaggtgctg
ctgaaggtgatctcacggatgaaaagcttagcccctggagacagagaggtcatgcagacc
ctcgtgaaacaggactctggctcaggtggcttcagttccctgatgttagcagctctggaa
aggcagactctctcagcaacggccatttggcaactactgctagcagttcaagagcctgag
acctgcccactgaacctgctcttggaggaagtaggaaaggaggctggcgctggggctttc
ttccgggtagtgactgccccagagagcacagtattggaagccatcctgaggcacagcaaa
ctgctccgggaagccatccagcagacagcggggtgtgagcgcctttcttcagaggaagaa
cacctggcagagatcgtgcaagagatgctgagcatatcctccgagacagtgagccctgaa
gcctccctgagagcggtgctgagcaaagccatggagaaatctgtctcggcctctgtggtc
tgtcacctcctctgcagtatccacaagtctttccctggcctgcagcccctcatgcaggag
ttggcacatgttggtttccttaccaaggaaagcggagaggagaggtggaaggtgactgat
ggtcttcaccctggagccaaggacaaagcggaggaagcagccaaggcaaccagagaagac
tgccaggccaatgaacaaaaggagcagggagagcctggacccgtgccagagcaacaggag
aaagacacttctgcctccccagactctgccaagaagagcttcgtctgcaaagcctgtgac
aagagcttccatttctactgccgtctgaaggtgcacatgaagcgctgccgggtggccaag
agcaggcaggtgcagagcgaggagggcagcgagaccaagggctcggagaaggggctggag
aagcagcagccggacgcccgaggcacaggtggggagcccgatgcccccaagaagaagaag
aagcggctgccagtgacatgtgacctctgcggaagagagtttgcccacgcctcaggcatg
cagtaccacaagctgaccgagcacttcgacgagaaacctttctcctgtgaggaatgcggg
gcgaagtttgcagccaactctaccctcaagaaccacctgcgcctgcacaccggggaccgc
ccgttcatgtgcaagcattgcctcatgaccttcacgcaggcctccgccctggcttaccac
accaagaagaagcactcagaagggaaaatgtacgcgtgccagtactgtgacgccgtgttc
gcccagtcgatcgagctatcccggcatgtgaggacccacaccggggacaagccgtatgtt
tgtagggactgtggaaagggcttccggcaagccaacggcctctccatccacctgcacacc
ttccacacagacatagaagatccttatgactgcaagaaatgcaggatgagcttctccaca
ctgcaggaccaccggaagcacatccacgaggtgcacgccaaggagtaccacccctgcccc
acatgcgggaagatcttcagtgccccttccatgctggagcggcacatggtgacccatgtg
ggagggaagcccttcagctgtgggatctgtaacaaggcctaccagcaattgtctggattg
tggtaccacaatcggacgcaccacccagatgtgttcgctgctcagaaccatcggtcaccc
aagttctcatcactgcagtgcagctcctgtgacaagaccttttccaatactgtcgaacac
aagaagcacatcaaaacagaacacacagatgtgaagttccatgagtgtgaccagtgcaag
gagctcttccccacacccgctctgctccaggttcacgtcaagtgccagcattcagggtcg
cagccattccggtgcttgtactgtgcagccaccttccgcttcccgggagccctgcagcac
cacgtcaccacagagcacttcaagcagtcggaaagcaccttcccctgcgagctctgtggc
gagctcttcacctcccaggcccagcttgatagccacttggagtctgagcacccaaaggtg
gcaggcactgagtcccaggcagctgcctctcgcatggtgcaggtgatccgagctccggag
ccagcggccccggccgagcaggtgatcacgttggaggagacgcagctcgctggctcgcag
gtgtttgtgaccttgccagattcacagacctctcagaacagctccgagcttgtggcagtg
acggtggaggatttgctggatggtactgtcacattgatctgtggtgaggccaagtga
DBGET
integrated database retrieval system
