Mus caroli (Ryukyu mouse): 110293588
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Entry
110293588 CDS
T05910
Symbol
Prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00310
Lysine degradation
mcal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110293588 (Prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110293588 (Prdm2)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110293588 (Prdm2)
Enzymes [BR:
mcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
110293588 (Prdm2)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110293588 (Prdm2)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110293588 (Prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2H2_11
PyrI_C
zf-MYST
Motif
Other DBs
NCBI-GeneID:
110293588
NCBI-ProteinID:
XP_021017125
Ensembl:
MGP_CAROLIEiJ_G0026760
UniProt:
A0A6P5PHC2
LinkDB
All DBs
Position
4:complement(132793152..132894348)
Genome browser
AA seq
1708 aa
AA seq
DB search
MHQNTESVAATETLAEVPEHVLRGLPEEVRLLPSAVDKTRIGVWATKPILKGKKFGPFVG
DKKKRSQVRNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRA
IYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRRGKKKSQENKNK
GVRTQAVARKASELDSTSANMRGSAEGPKEEDERPLASAPEQPALLPEVVSQDAVPQVAI
PLPACESQPEADGKQEVTDCEVNNMKEEEEEEEELEEEEEEEELGEDGEEEADMPNESSV
KEPEIRCEEKPEDLLEEPQSVSTETSEGSPGVTPPLHVPRAREEANGDGLETFMFPCQHC
ERKFATKQGLERHMHIHISTINHAFKCKYCGKPFGTQINRRRHERRHETGLKRRPSMTLQ
SSEDPDDGKGENVTSKDELSPPQLGQDCLILNSEKTSQEILNSSFVEENGEVKELHPCKY
CKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPQPPAEQAPPSQNVYVPSTEPEE
DGDADDVYIMDISSNISENLNYYIDGKIQTNNSTSDCDVIEMESNSAHLYGIDCLLTPVT
VEITQNIKSTQGSVTDDLLKESPSSTNCESKKRRTASPPVLPKIKAETDSDSTAPSCSLS
LPLSISTTEVVSFHKEKGVYLSSKLKQLLQTQDKLTPPAGISAAEIPKLGPVCVSAPASM
LPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDTALTSKKPKLESRSDSPAWS
LSGRDERETGSPPCFDEYKISKEWAASSTFSSVCNQQPLDLSSGVKQKSEGTGKTPVPWE
SVLDLSVHKKPCDSEGKEFKENHLAQPAAKKKKPTTCMLQKVLLNEYNGVSLPTESTPEA
TRSPSPCKSPDTQPDPELATDSSCSAPTAESPPEVVGPSSPPLQAASLSSGQLPPLLIPT
EPSSPPPCPPVLTVATPPPPLLPTVPLPNPSSDASPQQCPSPFSNATAQSPLPILSPTVS
PSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSFSSSSCSSSSPSPPPLSAVSSVVSSG
DNLEAPLPAMTFKQEESESEGLKPKEEAPPAGGQSVVQETFSRNFVCNVCESPFLSIKDL
TKHLSVHAEEWPFKCEFCVQLFKGKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQH
QRDLHPDELCTHHEFESGTLRPQNFTDPSKAHVEHMPSLPEEPAEASREEELNDSSEELY
TTIKIMASGIKTKEPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFT
TAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLRQTVQPKNGVLVLDNSG
KNAFRRMGQPKRLSFNVELSKMSPNKLKLNALKKKNQLVQKAILQKNRSAKQKADLRDTS
EASSHICPYCDREFTYIGSLNKHAAFSCPKKPLSPSKRKVSHSSKKGGHASSASSDRNSS
SNPRRRTADTEIKMQSMQAPLGKTRARSTGPAQASLPSSSFRSRQNVKFAASVKSKKASS
SSLRNSSPIRMAKITHVEGKKSKAVAKSHSTQLSSKASRSLHVKVQKSKAVLQSKTALAS
KKRTDRFIVKSRERSGGPITRSLQLAAAADLSESRREDSSARHELKDLSYSLRLASRCAS
STAPYITRQCRKVKAAAATPFQGPFFKE
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagaacactgagtctgtggcagccactgagactctggctgaggtacctgaacac
gtgcttcgaggacttccagaggaagtaagacttttaccatctgcggtcgacaagactcgg
attggtgtctgggccactaaaccaattttaaaagggaaaaagtttgggccatttgttggt
gataagaagaagagatcccaggttaggaataatgtgtacatgtgggaggtgtactaccca
aatttggggtggatgtgcattgatgccactgatccagagaagggcaactggctccgctat
gtgaactgggcttgctcaggagaagaacagaatttatttccactggaaatcaacagagcc
atttactataaaaccttaaagccaatcgcgcctggcgaggagctcctggtctggtacaat
ggggaagacaaccccgagatagcagctgcgattgaggaagagcgagccagcgcccggagc
aagcggagctccccgaagagccggagagggaagaagaaatcacaggagaataaaaacaaa
ggcgtcagaacccaggctgtagcgcggaaggcgagcgagctggactccacctctgcaaac
atgaggggctctgcagaaggtccaaaagaagaggatgagaggcctttggcttctgcacct
gagcagccagcccttctgccagaggtggtaagccaggatgcagttccacaggtggccatc
cctcttcctgcctgcgagtcacagccagaggcagatgggaaacaagaagtcacagactgt
gaggtcaacaatatgaaggaagaggaagaggaggaggaggagctggaagaggaagaagag
gaggaggagttgggagaagatggggaggaagaagcagacatgcctaatgaaagctctgtg
aaagagccagagatacggtgtgaagaaaagccagaagatttactagaagagccacagagt
gtgtcaactgaaacttctgaaggctctccaggcgtcacccctcctctccacgttcccaga
gctagagaggaggccaacggtgatgggcttgaaacattcatgtttccatgtcagcattgt
gaaagaaaatttgcaacaaagcaggggctagaacgtcacatgcacatccacatttctaca
atcaaccacgctttcaagtgcaagtactgtgggaaaccatttggcacacagatcaacagg
aggcggcatgaaaggcgccacgaaacagggttgaagagaagacccagcatgacattacaa
tcctcagaggatccagatgatggcaagggggaaaatgttacttctaaagatgagttgagt
ccacctcaacttgggcaagactgtttgatattgaactcagagaaaacctcacaggaaata
ctgaattcatcttttgtggaagaaaatggtgaagttaaagaacttcatccatgcaaatac
tgcaaaaaggtatttggaactcatactaatatgagacgacatcagcgtagggttcacgaa
cgccacctgatccccaaaggtgtccggcgaaaaggaggcctcctagaagaaccgcagcca
ccagcagagcaggccccgccctcccagaatgtctatgtaccaagcacagagcccgaggag
gacggggacgcggatgatgtgtatatcatggacatttctagcaacatctctgagaaccta
aattactatattgatggtaagattcagaccaacaacagcactagtgattgtgatgtgatt
gagatggagtctaactctgcacacttgtatggcatagattgtctgctcactccagtaact
gtagagattactcaaaacataaagagcactcagggctctgtgacagatgatcttcttaaa
gagtctcccagtagcacaaattgtgagtccaagaaacggaggactgccagtccacctgta
ctccctaaaattaaagcagagacagattctgattccacggcaccctcgtgttccttaagt
ctgcctctgagcatatcaacaacagaggtggtgtctttccataaagagaagggtgtctat
ttgtcttcaaagctcaagcagcttcttcagacccaggacaaactgactcctcctgcaggg
atttcagcagctgagattcctaagttaggtcctgtgtgtgtatctgctcctgcatccatg
ttacctgtgacttctagtaggtttaagaggcgcaccagctctccacccagttctccacag
cacagccctgcccttcgagactttgggaaaccaagtgatgggaaagcagcatggacagac
acagctctgacttccaagaaaccgaagttagaaagtcgtagtgactcaccagcgtggagt
ttgtctgggagagatgagagagaaactggaagccctccttgctttgatgaatacaaaata
tcaaaagaatgggcagccagttctactttcagcagcgtgtgcaaccaacagccgttggat
ttatccagcggtgtcaaacagaagtcagagggcacaggcaagactccagtcccatgggaa
tctgtattggatctcagtgtgcataaaaagccttgtgattctgaaggcaaagaattcaaa
gagaaccatttggcacagccagctgcaaagaagaaaaaaccaaccacctgcatgctacaa
aaggttcttctcaatgaatataatggtgttagcttacctacagaaagcacaccagaggcg
accaggagcccaagcccttgtaaatcaccagacacgcagccagatcctgaacttgctact
gactcgagttgctcagcccccactgctgagtctccacctgaggttgttggcccttcatca
ccccctctccaggcagcctccctgtcctctggtcagctgcctcctctcttgatccccaca
gagccttcttcccctccaccctgccctcctgtgttaactgttgccactccaccacctccc
ctccttccgactgtccctctccccaacccctcttctgatgcctctcctcaacagtgcccc
tctccattctcaaatgccactgctcagtctcctcttccgattctctcccccacagtgtcc
ccctctccctctcctattcctcctgtagagccactcatgtctgctgcttcccctggtcct
ccgacactctcttcctcttcctcctcttcctcctcctcttccttctcttcctcttcctgt
tcctcctcctccccctcaccaccccctctctcagcagtgtcatctgtggtgtcctctggg
gacaacctggaagcacctctccctgcgatgactttcaaacaggaggagtcagagagtgaa
ggtctgaaacccaaggaagaggccccacctgcaggtggacagagtgttgtccaagaaaca
ttcagcagaaactttgtctgcaatgtctgtgaatcaccttttctttccattaaagaccta
accaaacatttatctgtccatgctgaagaatggcccttcaaatgtgagttttgtgtgcag
ctttttaagggtaagaccgatctatcagagcaccgatttctgcttcatggagtcggaaat
atctttgtgtgttctgtatgtaagaaagaatttgccttcttatgcaatttacagcagcac
cagcgtgatctccacccagatgagttatgcacacaccacgagtttgaaagtgggaccctg
aggccccagaacttcacagaccccagcaaggcccatgtggagcatatgccgagtttgcca
gaagagcctgcggaagcttctagagaggaggagttaaatgactcctctgaagagctttac
acaaccatcaaaataatggcttccggaataaagacgaaagagccagatgttcgacttggt
ctcaaccagcattacccgagctttaagccacctccatttcagtaccaccatcgaaaccct
atggggattggggtaacagccacaaacttcaccacccacaatatcccacagactttcact
actgccatccgctgcacaaagtgtggcaagagtgttgataacatgcctgagctgcataag
cacatcttggcgtgtgcgtctgcaagtgacaagaagaggtacactcctaagaaaaaccca
gtgccgctgagacagacagtgcagcccaaaaatggagtgctggttttagacaactctggg
aaaaatgccttcagacggatggggcagcctaagagactgagcttcaatgttgaactcagc
aaaatgtctccaaataagctcaagctgaatgcattgaagaaaaaaaatcagctggtacag
aaagcgatccttcagaagaacagatctgcgaagcagaaggcagacctgagggacacttcc
gaggcatcctcacacatctgcccttactgtgacagggagttcacgtacattggcagcctg
aataagcatgctgctttcagctgtcctaaaaaacccctttctccttccaaaagaaaagtt
tcccattcatctaagaaaggtggccacgcatcatctgctagcagtgacagaaacagtagt
agcaatccccggaggcgcaccgcagatacagagatcaagatgcagagcatgcaggcaccc
ttgggcaagacccgagctcggagtacaggccctgcccaagcctcactgccctcctcatcc
ttcagatccagacagaatgtcaaatttgcagcttcagtcaaatccaaaaaagcaagctct
tcatccttgaggaattctagtcccataagaatggctaaaattactcatgttgagggcaaa
aaatccaaagctgttgccaagagtcattctactcagctctccagcaaagcatcccgaagc
ctgcacgtgaaagtgcagaagagcaaagctgttctacaaagcaagactgccctggccagc
aagaaaagaacagaccggttcatagtaaaatctagagagcggagcgggggcccaatcacc
cgaagccttcagctggcagctgctgcggacctgagtgaaagcaggagagaggatagcagt
gccaggcatgagctgaaggacttgagctacagcctccgcctggcatcgcgatgcgcctca
tcaacagccccttatattaccagacaatgcagaaaggtcaaggctgcagcagcaactccg
ttccagggacccttcttcaaagagtag
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