Mus caroli (Ryukyu mouse): 110293779
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Entry
110293779 CDS
T05910
Symbol
Ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04020
Calcium signaling pathway
mcal04080
Neuroactive ligand-receptor interaction
mcal05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110293779 (Ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110293779 (Ptafr)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
110293779 (Ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mcal04030
]
110293779 (Ptafr)
G protein-coupled receptors [BR:
mcal04030
]
Rhodopsin family
Others
Platelet activating factor
110293779 (Ptafr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
Frag1
Motif
Other DBs
NCBI-GeneID:
110293779
NCBI-ProteinID:
XP_021017303
Ensembl:
MGP_CAROLIEiJ_G0026570
UniProt:
A0A6P5PHQ5
LinkDB
All DBs
Position
4:122205835..122221018
Genome browser
AA seq
341 aa
AA seq
DB search
MEHNGSFRVDSEFRYTLFPIVYSVIFILGVVANGYVLWVFANLYPSKKLNEIKIFMVNLT
MADLLFLVTLPLWIVYYYNEGDWILPNFLCNVAGCLFFINTYCSVAFLGVITYNRYQAVA
YPIKTAQATTRKRGISLSLIIWVSIVATASYFLATDSTNLVPNKDGSGNITRCFEHYEPY
SVPILVVHVFIAFCFFLVFFLIFYCNLVIIHTLLTQPMRQQRKAGVKRRALWMVCTVLAV
FIICFVPHHVVQLPWTLAELGYQTNFHQAINDAHQITLCLLSTNCVLDPVIYCFLTKKFR
KHLSEKFYSMRSSRKCSRATSDTCTEVIVPANQTPIVPLKN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcacaatggctcctttcgtgtggattctgagttccgatacacgctctttccgatt
gtttacagtgtcatctttatactgggggtggttgccaacggctatgtgctgtgggtcttt
gctaacttgtacccttccaagaaactaaatgagataaagatctttatggtgaatctcact
atggctgacctgctcttcctggtcaccctcccactgtggattgtctactactacaacgag
ggcgactggattctacccaacttcctgtgcaacgtggctggctgcctcttcttcatcaat
acctactgcagtgtggcctttttgggtgtcatcacttataatcgctaccaggcagtagcc
tatcccattaagactgcacaggccaccacccgcaagcgtggcatctctttgtccctgatc
atttgggtatccattgtggctactgcctcctatttcctggccacagactccaccaaccta
gtgcccaataaggatggctcaggcaacatcacccgctgctttgagcattatgagccatac
agtgtgcccatccttgttgttcatgtcttcatcgccttctgcttcttcctcgtcttcttc
cttatcttctactgcaacttggtcatcatccacacgctgctcacgcagcccatgcggcag
cagcgcaaagcgggggtgaagcggagggcgctgtggatggtctgcacggtcttggccgta
ttcatcatctgttttgtgccccatcacgtggtccagctgccctggaccctagcagagttg
ggctaccagaccaacttccatcaggctattaatgatgcccatcaaatcaccctctgtctc
ctcagcaccaactgtgtcttagatcccgttatctactgttttcttaccaagaagttccga
aagcacctcagtgagaagttttacagcatgcgcagtagccggaagtgctccagagccacg
agtgacacgtgcaccgaggtgatagtgccagccaaccagactcctatcgtgccgctgaaa
aattaa
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