Mus caroli (Ryukyu mouse): 110293837 Help Entry 110293837         CDS       T05910                                  Symbol Atxn2 Name (RefSeq) ataxin-2 isoform X1   KO K23625   ataxin 2/2L Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal05014   Amyotrophic lateral sclerosis mcal05017   Spinocerebellar ataxia mcal05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:mcal00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     110293837 (Atxn2)    05017 Spinocerebellar ataxia     110293837 (Atxn2)    05022 Pathways of neurodegeneration - multiple diseases     110293837 (Atxn2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mcal03019]     110293837 (Atxn2) Messenger RNA biogenesis [BR:mcal03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      110293837 (Atxn2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SM-ATX LsmAD PAM2 LSM Motif Other DBs NCBI-GeneID:  110293837 NCBI-ProteinID:  XP_021017344 Ensembl:  MGP_CAROLIEiJ_G0027692 UniProt:  A0A6P5PQB3 LinkDB All DBs Position 5:114741438..114843803 Genome browser AA seq 1289 aa AA seqDB search MRPSTAAAHRPAAGGPEPRRPAGWAARRSLPRTARRGGRGGAVAYPSAGPPPRGPGAPPR GPRSPPCASDCFGSNGHGASRPGSRRLLGVCGPPRPFVVVLLPLAPAAAPARACLPGVRA SPPRSGVSSSTRPAPGCPRPACEPVYGPLTMSLKPQPQPPAPATGRKPGGGLLSSPGAAP ASAAATSASVVPAPAAPVASSSAAAGGGRPGLGRGRNSSKGLPQPTISFDGIYANVRMVH ILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESVLF KCSDFVVVQFKDTDSSYARRDAFTDSALSAKVNGEHKEKDLEPWDAGELTASEELEALEN DVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIES SAQYKARVALENDDRSEEEKYTAVQRNSSDREGHGPNTRDNKYIPPGQRNREVIPWGSGR QSSPRMGQPGPGSMPSRAASHTSDFNPNAGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSG PNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRH PRNHRVSAGRGSMSSGLEFVSHNPPSEAAAPPVARTSPAGGTWSSVVSGVPRLSPKTHRP RSPRQSSIGNSSSGPVLASPQAGIIPAEAVSMPVPAASPTPASPASNRALTPSIEAKDSR LQDQRQNSPAGNKENIKASETSPSFSKADNKGMSPVVSEHRKQIDDLKKFKNDFRLQPSS TSESMDQLLSKNREGEKSRDLIKDKTEASAKDGFIDSSSSSSSSNCTSGSSKTNSPSISP SMLSNAEHKRGPEVTSQGVQTSSPACKQEKDDREEKKDTTEQVRKSTLNPNAKEFNPRSF SQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPM TPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQ QFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSAAQFGAHEQTHAM YACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGS HPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQSSFPAAQQT VFTIHPSHVQPAYTTPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQS ALQPIPVSTTAHFPYMTHPSVQAHHQQQL NT seq 3870 nt NT seq  +upstreamnt  +downstreamnt atgcgtccgtccaccgccgccgctcaccggcccgcggcggggggccccgagccgcgccgc ccggcgggctgggctgcgcggcgctcgctcccgcggacggcgcggcgcggcgggcggggc ggcgcggtggcgtatccctccgccggccctcccccgcgcggccccggcgcccctccccgc gggccgcgttcgccgccctgcgcctcagactgttttggtagcaacggccacggcgcgtcc cggcccggctcccggcggctgctcggtgtctgcgggcctccccgccccttcgtcgtcgtc ctgctgcctctggctcccgcggccgcgccggcccgcgcctgcctgcccggcgtccgcgcg tccccgccgcgctccggcgtctcctcctcgacgcgcccggctcccggctgtccccgcccg gcgtgcgagccggtgtatgggccgctcaccatgtcgctgaagccgcagccgcagccgccc gcgcccgccactggccgcaagcccggcggcggcctgctctcgtcgcctggcgccgcaccg gcctcggccgcggcgacctcggcttctgtggtgccggccccggccgcgccggtggcgtct tcctcggcggccgcgggcggcgggcgtcccggcctgggcagaggtcggaatagtagcaaa ggactgcctcagcctacgatttcttttgatggaatctatgcaaacgtgaggatggttcat atacttacatcagttgttggatcgaaatgtgaagtacaagtgaaaaacggaggcatatat gaaggagtttttaaaacatacagtcctaagtgtgacttggtacttgatgctgcacatgag aaaagtacagaatccagttcggggccaaaacgtgaagaaataatggagagtgttttgttc aaatgctcagacttcgtcgtggtacagtttaaagatacagactccagttatgcaaggaga gatgcttttactgactctgctctcagtgcaaaggtgaatggtgagcacaaggagaaggac ctggagccctgggatgcaggggagctcacggccagcgaggagctggaggcgctggagaat gatgtgtctaatggatgggaccccaatgacatgtttcgatataatgaagagaattatggt gtggtgtccacatatgacagcagtttatcttcatatacggttcctttagaaagggacaac tcggaagaatttctaaaacgggaggcaagggcaaaccagttagcagaagaaattgaatcc agtgctcagtacaaagctcgtgtcgcccttgagaatgatgaccggagtgaggaagaaaaa tacacagcagtccagagaaactccagtgaccgggaggggcatggccccaacactagggac aataaatatattcctcctggacaaagaaacagagaagtcataccctggggaagtgggaga cagagctcaccacggatgggccagcctggaccaggctccatgccgtcaagagctgcttct cacacttcagatttcaacccgaacgctggctcagaccaaagagtagttaatggaggtgtt ccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggt cccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccctcg aggccctccagacccccgtctcacccctctgctcatggttctccagctcctgtctctact atgcctaaacgcatgtcttcagaaggacccccaaggatgtctccaaaggcacagcgccac cctcggaatcacagagtctctgctgggagaggctccatgtctagtggcctagaatttgta tcccacaatcccccaagtgaagcagctgctcctccagtggcaaggaccagtcctgcaggg ggaacgtggtcctcagtggtcagtggggttccaaggttatctcccaaaactcacagaccc aggtctcccaggcagagcagcattggaaactcttccagcgggcctgtgcttgcttctccc caagctggcatcatccctgctgaagccgtttcaatgcctgttcccgccgcatctccgact cctgccagccctgcgtccaacagagcactgaccccatctattgaggcaaaagattccagg cttcaagatcagaggcagaactctcctgcagggaataaagaaaatattaaagcaagtgaa acatcacctagcttttcaaaagctgacaacaaaggtatgtcaccagttgtttctgaacac agaaaacagattgatgacttaaagaagtttaagaatgattttaggttacagccaagttct acatctgaatctatggatcaactactaagcaaaaatagagaaggagaaaagtcacgagat ttgatcaaagataaaacggaagcaagtgctaaggatggtttcattgacagtagcagcagc agcagcagcagcaactgcaccagtggcagcagcaagaccaacagccctagcatctcccct tccatgcttagtaatgcagagcacaagagggggcctgaggtcacgtcccaaggggtgcag acttccagcccagcctgcaaacaagagaaggatgacagagaagagaagaaagacacaacg gagcaggttaggaagtcaacattgaatcccaatgccaaggagttcaaccctcgttctttc tctcagccaaagccttctactaccccaacgtcacctcggcctcaagcacaacccagccca tctatggtgggtcatcagcagccagctccagtgtacactcagcctgtgtgctttgcaccc aatatgatgtatcccgtcccagtgagcccaggcgtgcaacctttatacccaatacctatg acgcccatgcctgtgaaccaagccaagacatatagagcaggtaaagtaccaaatatgccc caacagcgacaagaccagcatcatcaaagcaccatgatgcaccctgcctccgcggcaggg ccacccatcgtagccaccccgcccgcttactccactcagtacgttgcctacagccctcag cagtttcccaatcagcctttggtccagcatgtgccgcattatcagtctcagcatcctcat gtgtacagtcctgtcatacaaggtaatgccaggatgatggcaccaccagcacatgctcag cctggtttagtgtcttcttcagctgctcagttcggggctcacgagcagacgcacgccatg tatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctactttgccatt tccaccggctccctcgctcagcagtatgcacaccctaatgccaccctgcatccacatact cctcatcctcagccttcggccactcccaccggacagcagcaaaaccagcatggtggaagt catcctgcacccagtcctgttcagcaccatcagcaccaggctgcccaggctcttcatctg gccagtccacagcagcagtcggccatttatcatgcggggctggcaccaacaccaccttcc atgacacctgcctctaatacacagtctccacagagcagtttcccagcagcacaacagaca gtcttcaccatccacccttctcatgttcagccggcatacaccaccccaccccacatggcc cacgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcg ccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagt gcactacagcccattccagtctcgacaacagcgcatttcccttatatgacgcacccttca gtacaagcccaccaccaacagcagttgtaa

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