Mus caroli (Ryukyu mouse): 110293911
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Entry
110293911 CDS
T05910
Symbol
Prom1
Name
(RefSeq) prominin-1 isoform X2
KO
K06532
prominin 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110293911 (Prom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110293911 (Prom1)
04090 CD molecules [BR:
mcal04090
]
110293911 (Prom1)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110293911 (Prom1)
CD molecules [BR:
mcal04090
]
Proteins
110293911 (Prom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF2207_C
Baculo_PEP_C
DUF1664
RasGAP_C
WLS-like_TM
Apolipoprotein
FliD_N
DUF7061
SUR7
DUF3573
Exonuc_VII_L
ApoLp-III
Fez1
CheZ
Mce4_CUP1
IFT57
HIP1_clath_bdg
CENPH
ATG17_like
Laminin_II
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
110293911
NCBI-ProteinID:
XP_021017446
Ensembl:
MGP_CAROLIEiJ_G0027198
UniProt:
A0A6P5PP30
LinkDB
All DBs
Position
5:complement(38388333..38495718)
Genome browser
AA seq
827 aa
AA seq
DB search
MALVFSALLLLGLCGKITSEGQPAFHNTPGAMNYELPTTKYETQDTFNAGIVGPLYKMVH
IFLNVVQPNDFPLDLIKKIIQNKNFDISVDSKEVALYEIGVLICTILGLLFIILMPLVGC
FFCMCRCCNKCGGEMHQRQKQSAPCRRKCLGLSLLVICLLMSLGIIYGFVANQQTRTRVR
GTQKLAESNFRDFQTLLTETSKQIDYIVEQCNNTKNKVFSDLDGIGSMLGGRIKDQLKPK
VTPVLEEIKAMSTAIKQTKDALQNMNSSLKSLQDATTQLNTNLTSVRNSIENSLSSSDCT
SDPASKICDSIRPSLSSLGSNLNSSQLPSVDRELNTVTDVDKTDLESFVKRGYTAIDEIP
NTIQNQTVDVIKDVKATLDSISSNIKDMSQSIPIEDMLLQVSHYLNNSNRYLNEELPKLE
EYDSYWWLGGLIVCFLLTLIVTFFFLGLLCGVFGYDKHATPTRRGCVSNTGGIFLMAGVG
FSFLFCWILMILVVLTFVVGANVEKLLCEPYENKKLLQVLDTPYLLKEQWQFYLSGMLFN
KPDINMTFEQVYRDCKRGRGAYAAFQLENVVNISDHFNIDKLSENINTELENLNVNIDSI
ELLDNTGRKSLEDFAHSGIDTIDYSTYLKETEKSPTEVNLLTFASTLEGKANQLPEGKLK
QAFLLDVQNIRAIHQQLVPPVQQSLNTLRQSIWTLQQTSNKLPEKVEKILASLDSVQHFL
TNNVSLIVIGETKKFGKTILGYFEHYLHWVFYAITEKMTSCKPMATAMDSAVNGILCGYV
ADPLNLFWFGIGEATVLLLPAVIIAIKLAKYYRRMDSEDVYDDPSRY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgtcttcagtgccctgctgttactggggctgtgtggaaagatcacttcagaa
ggtcaacctgcattccataacactcccggggctatgaattatgaattgcctaccaccaaa
tatgagacccaagataccttcaatgctgggattgttggccctctctacaaaatggtgcac
atcttcctcaacgtggtccagccgaatgacttccctctagatttgatcaaaaaaatcata
cagaacaagaactttgacatctcagttgattccaaggaggttgccctctatgagatcgga
gttcttatctgcaccatcctgggcctgctgttcattatcctcatgcctctggtgggctgc
ttcttttgtatgtgccgttgctgcaacaaatgcggcggagagatgcaccagcggcagaag
cagagtgcgccatgccggaggaagtgcttgggcctctccctcctggtgatttgtctgctc
atgagccttggcattatatatggctttgtggctaaccaacagacgaggacgcgggtcaga
gggacccagaaactggcagagagcaatttcagagactttcaaacactcctgactgaaacc
tcaaagcaaattgactatatagtggagcagtgcaacaacaccaagaacaaggtgttctca
gacctggatggcatcggttccatgctgggaggcagaataaaggaccaactaaaacccaaa
gtaactcctgttctcgaagagattaaggccatgtcaacagccatcaaacagaccaaggat
gccctgcagaacatgaacagcagcctgaaaagtctccaagatgcaaccacccagctcaat
accaacctgacctctgtgagaaacagcatcgagaattcactcagcagcagtgactgtact
tcagatccagccagcaagatctgcgatagcatcagaccaagcctaagcagtctggggagc
aacctcaattcaagtcagctcccatcagtggatagagaactcaacactgttactgatgtc
gacaaaacggatctggagagcttcgtcaaaagggggtatacggcaattgatgaaataccc
aatacaatacaaaaccaaactgtggatgtcatcaaagacgtcaaagcaaccttggactcc
attagctccaacattaaggacatgagccaaagtattcctattgaggatatgctgttacag
gtctcccattaccttaataacagcaacagatacttaaacgaggagctgcccaagctggaa
gaatatgactcgtactggtggctgggtggcttgattgtctgcttcctgctgaccctcatt
gtgactttctttttcctgggcttgctgtgtggtgtgtttggctatgacaagcatgccacc
ccaactagaagaggttgcgtgtccaacactggaggcatctttctcatggctggggttgga
ttcagcttccttttttgctggatattgatgatccttgtggttcttacgtttgttgttggt
gcaaatgtggaaaagttgctctgcgaaccttatgaaaacaagaaattattacaggttttg
gacactccctatctgctcaaggaacaatggcaattttatctctctggcatgctattcaat
aaaccagacattaacatgacctttgagcaagtctacagggattgcaagagaggtcgaggt
gcatatgctgcttttcagctggagaatgtcgtcaacatcagtgatcatttcaacattgac
aagctttctgaaaacataaatacggagttggaaaacctgaatgtgaacattgatagcatt
gaactgttggataacacaggaaggaagagcctcgaggactttgcacattctgggatagat
acaatcgattattccacatacttgaaggagactgagaaatcccctaccgaagtgaatctg
ctgacatttgcctctaccctggaaggaaaagcaaaccagttgcctgaaggaaagttgaaa
caggccttcttactggatgtacagaatataagagccatccaccagcagcttgtccctcct
gtgcagcaatcactgaatacgttaagacaaagtatctggaccctccagcagacaagcaac
aagttgccggagaaagtggagaagatccttgcctctttggattctgttcagcatttcctc
accaataatgtttccctcatcgttatcggggaaacgaagaagtttgggaaaacaatacta
ggctactttgaacattatctgcactgggtcttctatgccatcacagagaagatgacatcc
tgcaaacccatggccaccgcgatggactctgctgttaatggcattctgtgtggctatgtt
gctgaccctctgaatttgttctggttcggcataggggaagccacggtgctcttacttccg
gctgtaatcattgctatcaagctggccaagtactatcgcaggatggattcagaggatgta
tacgatgacccgtctcgatactga
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