Mus caroli (Ryukyu mouse): 110293950
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Entry
110293950 CDS
T05910
Symbol
Pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110293950 (Pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110293950 (Pex1)
Membrane trafficking [BR:
mcal04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
110293950 (Pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_16
AAA_lid_3
AAA_14
nSTAND3
AAA_22
ABC_tran
RuvB_N
TIP49
AAA_19
RNA_helicase
AAA_5
AAA_18
AAA_33
Sigma54_activat
AAA_28
AAA_29
Sigma54_activ_2
DUF815
Mg_chelatase
AAA_7
Zeta_toxin
T2SSE
IstB_IS21
AAA_2
ATP-synt_ab
Bac_DnaA
ATPase_2
NACHT
NTPase_1
APS_kinase
ABC_ATPase
CobU
Motif
Other DBs
NCBI-GeneID:
110293950
NCBI-ProteinID:
XP_021017512
Ensembl:
MGP_CAROLIEiJ_G0026933
UniProt:
A0A6P5PMV2
LinkDB
All DBs
Position
5:336044..373120
Genome browser
AA seq
1284 aa
AA seq
DB search
MWSSDRLAGAGSGGAVVTVAFTNARDCFLHLPRRLVAQLHLLQNQAIEVASDHQPTYLSW
VEGRHFNDQSENVAEINRQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILE
LHAISLEQHLLDQIRIVFPKAVVPIWVDQQTYIFIQIVALMPAAPYGRLETNTKLLIQPK
TRQAKESTLPKEGDAHGQVHSYGREQKGLSKELQSKQLHTNSEGVTASNGRDPKVPGGSL
KPSWWAMLGSMFSFGPDNKQESAWGSLELGAFKNMQSQAAPLDSTFRVCQVQPPSARTTT
ATSVFQKHCTAHVFPWDQEYFDVEPSFTVTYGKLVKLHSPKQQQDKSKQGVLLPDKEKQL
SKSPDHKQISSNHSEEAAEACVLKVVWNGLEELKNATEFTKSLEPLHRGKVWIPDDLRKR
LNIEMHAVVRITPLETTPKIPRSLKLQPRENLPKDVNEETIKTVFSSWVQQSATTMLPLV
ISKEECIKLEIKDGMKEFSLSTVHSQEKEKEQGKAVFVLSSILLQKISVQVLLEPMIREE
QSEEIDFLLPSLTLSSLGGVSALGVFAMDHITHSLLGRPMSRQLMALVAGLRNGALLITG
GKGSGKSTLAKAICKEAQDTLDAHVETVDCKALRGKRLENIQKALEVVFSEATWRQPSVI
LLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEFVSTGSLVALIATSKLQQSLH
PSLVSAQGIHTFQCVQHLQPPNQEQRCEILHSVVKNKLGCDISKSPDLDLQCIAKETEAF
VARDFTVLVDRAIHSSLSRQHSSSREELTLTTSDFQKALRGFLPASLRNVNLHKPRDLGW
DKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESG
MNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDR
VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTV
LSKSLALADDVDLQHVASVTDSFTGADLKALLYSAQLEALQGRLLPSGLPDGGSSSDSDL
SLSSMVFLNHSSGSDDSAGDGECGLEQSLLSLEMSEMLPDESKFNMYRLYFGSSYESELG
NGTSSDLSSHCLSAPSSMTQDLPAAPGKDPLFTQHPVFRTPSQEGCQDLTQEQRDQLRAE
ISIIKGRYRSQSGEDESLNQPGPTKTTFAISQAHLMTALAHTRPSISEDEGKEFAELYEN
FQNPKKRKNQSGTVFRTGQKVTLA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagcgatcgcttagcgggtgcggggtctggtggggcggtcgtgacggtggcc
ttcacgaacgctcgggactgcttcctgcatctgccgcggcgcctcgtggcccagcttcac
ctgctgcagaatcaagctatagaagtggccagcgatcaccagcctacctacctgagctgg
gtggaaggcaggcattttaatgatcaaagtgaaaatgtggcagaaattaatagacaagtt
ggccagaaacttggactctcaagcggggatcaggtgtttctcaggccttgttcccatgtg
gtatcttgccaacaggttgaagtggagcctctctcagcagatgactgggaaatactggag
ctgcacgccatttcccttgaacagcatcttctagatcagattcgaatagttttccccaaa
gctgttgttcccatctgggttgaccagcagacctacatatttatccagatcgtcgctctg
atgccagctgccccttatggaaggctagaaactaacaccaaactccttattcagccaaag
acacgccaagccaaagagagcacacttccaaaagaaggagacgcacatggacaagttcat
agttatgggcgagaacagaaaggattgtcaaaggaattgcaaagcaagcagcttcatacg
aactcagagggtgtcactgcgtccaatggaagagacccaaaagtcccaggtggctcgttg
aagccaagctggtgggctatgctaggaagcatgttttcctttgggccagacaataaacag
gagtcagcctggggctcgttggaacttggtgctttcaaaaacatgcagtcacaggctgcc
cctctggacagtactttcagggtatgccaagttcagccacctagtgcgcgtaccaccacc
gctacctctgtgtttcaaaaacactgcaccgcccatgtatttccgtgggaccaagaatat
tttgatgtggagcccagctttactgtgacctatggaaaactagttaagctacattctcca
aaacaacagcaagacaaaagtaagcagggtgtcctgttgcctgacaaagagaagcagctg
tccaagtctccagatcataagcagatcagctccaaccacagtgaggaggctgctgaggcc
tgtgtgctgaaggtagtctggaatggacttgaggaattgaagaatgccacagagttcacc
aaaagtctagagcctctccaccgtgggaaagtctggattccagatgacctgagaaagaga
ctaaatatagaaatgcatgcagtagtcagaataactccactggaaaccacgcctaaaatc
ccaagatctctgaaattacaacctagagagaacttacctaaagacgtcaatgaagaaact
ataaaaacagtgttctcatcttgggtacagcagtctgctaccacgatgcttcctttggta
atatcaaaggaagagtgtattaagctggaaattaaagatgggatgaaagagttctctctg
agtacagttcattctcaggaaaaagaaaaggaacaaggaaaagctgtgtttgtgttgagt
tccatcctgctgcagaagatctcagtacaagtccttctagagcccatgataagagaagaa
cagagtgaggaaattgactttcttcttccctctttaacgctgagctctttgggaggagtg
agcgccttaggtgtatttgcaatggaccacatcactcacagtctcctaggacgcccgatg
tctcggcagctgatggccctcgttgcaggacttaggaatggcgctcttttgatcactgga
ggaaagggaagcgggaagtcaacattagcgaaagccatctgtaaggaagcacaggacact
ctggatgcccatgtggagacagtcgactgcaaagctttacgaggaaaaaggcttgaaaac
atacaaaaagccctagaggtggttttctcagaggccacctggaggcagccatctgtcatt
ctgctggatgacctggacctcattgccggactgccaagtgtcccagagcaggagcacagc
cctgaagcagtgcagagccagcggcttgcacatgctttaaatgatatgatcaaagagttt
gtttccacgggaagcttggtagcactcatcgccacaagcaagctccagcagtctctgcac
ccttcccttgtgtctgctcaaggaatccacacgtttcagtgtgtccagcaccttcagcct
cccaaccaggaacagagatgtgaaattctgcacagtgttgtgaagaataaactgggctgt
gatataagcaagtcacctgacttggacctgcagtgcatagctaaagagacagaagcgttt
gtggctcgtgactttacagttcttgtggaccgagccatacactcttctctctctcgccag
catagctcctctagggaagaattgactttaacaacatcagacttccaaaaggctctccgt
ggatttcttcctgcttctctgcgaaatgtcaacttgcataaacctagagacctgggctgg
gacaagattggtggattacatgaagttcggcagatcctcatggatactatccagttacca
gccaagtacccagaattatttgcaaacttacccatacgacagagaacaggaatactgctt
tatggtcctccagggacaggaaaaactttacttgctggggtagttgcaagagagagtgga
atgaattttattagtattaagggaccagagttactcagcaaatatatcggtgcaagtgag
caagctgttcgagatgttttcatcagagcacaggctgcaaagccctgcattcttttcttt
gatgagtttgaatccatcgctcctcgaagaggccatgacaacacaggggttacagaccga
gtagtcaaccagttgctgacacagttagacggagtagaaggcttacagggagtttatgtg
ctggctgctactagtcgccctgacttgatcgaccctgccctgttgcggcctggcagactg
gataaatgtgtatactgccctcctccagatcaggtgtcccgtcttgagattttaactgtc
ctcagcaagtctctagctctggcagatgacgtggaccttcagcacgtggcgtcggtcact
gactccttcactggagcggatctgaaagctctgctgtacagcgctcagctggaggccttg
cagggtcggctgctgcccagcgggcttcccgatggaggctccagctctgacagtgacctg
agtctgtcttcaatggtctttcttaaccacagcagtggttccgacgactcagctggagat
ggagaatgtggcttagagcaatccctgctctctctcgagatgtctgagatgcttccagac
gaatcaaaattcaatatgtaccggctctactttggaagctcgtatgaatcagaacttgga
aatggaacctcttctgacttgagctcacactgtctgtctgcaccaagctccatgactcaa
gatttacctgcagctcctgggaaagacccgttatttacacaacatcctgtgttcaggaca
ccttcccaagaaggctgccaagacctcacacaggagcagagagatcagctgagggcagag
atcagcatcatcaaaggcagataccggagccaaagtggagaggatgaatcccttaaccag
cctggaccaaccaaaaccacttttgctattagccaggcacatttaatgactgcacttgcc
cacacaagaccatctattagtgaagatgaagggaaggaatttgctgagctgtatgagaac
tttcaaaatccaaagaagagaaaaaatcaaagtggaacagtgtttcgaactggacagaaa
gtaactttagcataa
DBGET
integrated database retrieval system
