Mus caroli (Ryukyu mouse): 110294052
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Entry
110294052 CDS
T05910
Symbol
Med13l
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110294052 (Med13l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110294052 (Med13l)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
110294052 (Med13l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
110294052
NCBI-ProteinID:
XP_021017700
Ensembl:
MGP_CAROLIEiJ_G0027653
UniProt:
A0A6P5PR51
LinkDB
All DBs
Position
5:111515604..111724097
Genome browser
AA seq
2221 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYDKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLINEEHLHMAQSSPAPFQVLVSPYGLNGTLTGHAYKMSDPAARKLIEEWH
CFYPMVLRKREEPREEAELGYDDDFPVAVEVIVGGVRMVYPSAFVLVSQNDIPVPQSGAG
AGGHVTVAQQGLGSVKDPSNCGMPLTPPTSPEQVVIGESGGVQSAASYLGSQDGGMTTMH
SPKRSRKTPPKLHSHMVRRVWRECILSRTQSKRSQMSTPTREEEPAHSPAAWDFVDPTQR
VSCSCSRHKLLKRCAVGPSRPPAISQPGFSAGLPSSSSLPPPASSKHKTAERQEKGDKLQ
KRPLVPFHHRPSVAEELCVEQDAPGQKLGLAGIDASLEVSNTRKYDKQMAVPSRNTSKQM
NLNPMDSPHSPISPLPPTLSPQPRGQEAESLDPPSVPVNPALYGNGLDLQQLSTIEDRTV
LVGQRLPLMAEASETALYSGLRPSYTESSDRWWQSFRLPSSEDAEFRPPELQGERFDTAL
DLNPESTALQRLLAQPNKRFKIWQDEQPQVQPLPFLDPSPLSQQPGDTLGEVNDPYTFED
GDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATK
TDVRQDSAAGRAGSGSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGTE
ERPPGKDGRAAGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVSSETVTALGMMES
PVVSMVPTHLTEFRMEVEDGLGSPKPEEIKDFSYVHKVPQFQPFVGSSMFAPLKTLPSHC
LLPLKTPDACLFRPSWAVPPKMEQLPMPPAASSIRDGYNNVPSVGSLADPDYLNTPQMNT
PVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQG
SPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNVFKDRNFDSCCICACNMNI
KGADVGLYIPDSSKEDQYRCTCGFSAIVNRKLGYNSGLFLEDELDIFGKNSDIGQAAERR
LMMCQSSCQSTLLPQVEGARKAPEPPVSLLLLLQNQHTQPFASLSFLDYISSTSRHALPC
VSWTYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHCWPHSNVLDTS
MLSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEES
PEPLPIPTLLVGYDKEFLTISPFSLPFWERLLLEPYGGHRDVAYIVVCPENEALLEGAKT
FFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTEELVSEWFNQPWSSEESDNH
SRLKLYAQVCRHHLAPYLATLQLDSGLLMPPKHQSPPAEAQGQATPGNAGSLPSNSGSGA
PPAGSAFNPTSSSSANPTASSSSASSGPPGSSAASAPGITQMNTTSSSGFGGGVGGQNPS
AGGSSTDRTPGNVACGDTEPGQSCTQSSQDGQDSVTERERIGIPTEPDSADSHAYPPAVV
IYMVDPFTYTAEEDSSSGNFWLLSLMRCYTEMLDHLPEHMRSSFILQIVPCQYMLQTMKD
EHVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSP
PFILAPIKDKQTEPGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNI
ALPSRTLHVPLSVRSRKSKVSARKVGLQKLWEWCLGIVQMTSLPWRVVIGRLGRLGHGEL
KDWSILLGECSLQTISKQLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMG
SVFGRSTALNMQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDL
PFPDDMDNDIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEE
LKQQPLALGYFVSTAKAENLPQWFWSSCPQARNQCPLFLKASLHHHISVAQTDELLPART
SQRAPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNM
L
NT seq
6666 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcggcgaactgggtggcgaacggggcgagcctggaggattgtcactccaac
ctcttctcgctggctgaactcacaggaatcaaatggcgtaggtacaattttggagggcac
ggggactgtggacccataatttcagccccagcccaagatgatccaatcctgttaagtttc
atccgctgtctgcaagccaacctgctgtgtgtatggcgtcgtgatgtcaagcccgattgc
aaagagctctggatattctggtggggagatgaacctaacctagtgggagtgatccaccat
gagctgcaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtaggacg
ctgctcttcaaagcaatccacaatctgttagaaaggtgcctaatggataagaacttcgtg
aggattgggaagtggtttgtgcggccctatgacaaggatgaaaagccagtcaacaaaagt
gagcatctgtcctgtgctttcacattcttccttcatggagagagtaacgtgtgcacaagt
gtggagatagctcagcaccagccgatctatttgatcaacgaggaacacttacacatggcc
caatcttcacctgcaccatttcaagtactggtgagtccttacggcttaaatggcacgcta
acagggcatgcatacaagatgtctgaccccgccgcccgcaagctgattgaggaatggcac
tgtttctacccgatggtgctgaggaagagggaggagcctcgagaagaggctgagctgggg
tatgatgacgacttcccggtggcagttgaagtcattgttggtggcgtccggatggtctac
ccttcggctttcgtgttggtctctcagaatgacatcccagttcctcagagtggtgctggt
gccggagggcacgtcacagtcgcacagcaggggcttggtagtgtgaaagaccccagtaac
tgtgggatgccactgactccccccacctccccagagcaggtggttataggagagagtgga
ggtgtgcagagtgctgccagttacctcggttcccaggatggagggatgacaactatgcac
agtccgaagagatcaaggaagacccctcctaaactgcacagtcacatggtccgtcgagtc
tggcgggagtgcatcctcagccgaacccagtctaagaggagccagatgtcaacacccact
cgggaagaagagcctgctcacagtcctgccgcctgggattttgtggacccaacccaaaga
gtcagctgctcctgctccaggcataaactgttaaaacggtgtgcagtaggacccagccga
cctcccgccatctctcagccaggcttcagtgcaggactgccatcatcttcatccttacca
ccccctgcttcttccaagcacaaaactgcagaaagacaagaaaaaggagacaagttgcaa
aagagacccttggtgccctttcaccacaggccctctgtggccgaagagttatgcgtggag
caggatgcgcctggacagaagctagggctggcagggatagacgcctccttagaggtgtcg
aacactcgaaagtatgataagcaaatggccgtgccttccagaaatacaagcaagcaaatg
aatctgaatcctatggattctcctcattcccccatctcccctctgccccccacactcagc
cctcagccacgaggtcaggaggcagagagtttggacccaccttctgtccctgtgaaccct
gccctctatggaaatgggctagaccttcagcagctgtctactatagaggacagaactgtc
cttgtaggccaaagactgcctctgatggcagaggccagtgagacagccttgtacagtggg
ctcaggccttcatacaccgagtcgtcagacaggtggtggcagagttttcgtctcccatcc
agtgaggatgctgagttccggcctccagagctgcagggggagaggtttgacactgccctg
gacctgaatcccgagagcacggccctgcaaagactcttagcacaacctaacaagcggttc
aaaatctggcaggatgagcagcctcaggtgcagcctctccccttcctcgacccatcacct
ctgtcccagcagcctggagacactctgggagaagtcaatgacccatacacctttgaggat
ggtgacataaagtacatcttcacagcaaacaagaagtgcaagcaggggacggagaaggac
tccctgaaaaagaacaagtcagaggatggatttggtaccaaggatgtcactacaccaggt
cattccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctactaaa
acagatgtccggcaggacagcgctgctggcagagctggctctgggagccttacccaggtg
acagatctggcaccttccctgcacgacttagacaacatctttgataactctgatgacgac
gagcttggggccgtgtcccctgctctacgctcatccaagatgcctactgttgggactgag
gagcggccccctgggaaggacggaagagctgctggcccttaccctccaacagttgcagac
ttgcaaaggatgttccccacccctccatcattggaacagcaccctgcattttctcctgtg
atgaactataaagatggagtaagttcagagacagtgactgcactgggcatgatggagagt
cccgtggtcagcatggtccccacacacctcacggagttcaggatggaagtggaagatggc
ttaggaagccccaagccagaggagataaaggacttttcctatgtgcacaaagtgccgcag
ttccagcctttcgtgggatcctccatgtttgctccgctgaagacgctgccgagccattgc
ctactgcctctgaagacacctgacgcctgtctgttccggccctcatgggcagtccctcct
aagatggaacagctgcccatgccccctgcagcctcttccattagagacggctacaataac
gtgcctagtgtcgggagccttgcagacccagactatctgaacacaccacagatgaacaca
cctgtgacactcaacagtgctgcccctgccagcaacagtggagctggagtcctcccatct
ccagctacccctcggttctctgtccccacaccacgaacccccaggactccaagaactccc
agaggtgggggcactgctagtggccaagggtctgtgaaatatgacagcacggatcagggg
tcaccagcttccaccccctctaccacaaggccccttaactctgtggagcctgccaccatg
cagccaattcctgaggcccacagtctctatgtcaccctcattctatcagactctgtgatg
aatgtcttcaaggacaggaactttgacagctgttgcatttgtgcctgcaacatgaacatc
aaaggggcagatgtcgggctgtacatccccgattcctccaaggaggaccagtaccgctgc
acctgtgggtttagtgcgatcgtgaaccggaaacttggctacaactcggggctcttcctc
gaagatgagctggatatttttgggaagaattctgacatcggccaagctgcagagagacgc
ctgatgatgtgccagtcctcctgccagtccaccttgcttcctcaggtggagggtgcccgg
aaagccccagagccccccgtaagcctcctcctcctcctccagaatcagcacacgcagccc
ttcgcttctctcagcttcctggattacatctcctccaccagtcgccatgcactcccctgt
gtgagctggacttatgaccgtgttcaggcagataacaatgattactggacagagtgcttc
aacgcattggaacaggggaggcaatatgtggataatcccacaggcgggaaagtggacgag
gctctggtgagaagtgccacagtacattgttggccgcacagcaacgtgctggacacaagc
atgctctcatcccaagatgtggtgcgcatgctgctgtccctgcagcccttcctgcaggat
gccatccagaagaagcgcacgggcaggacctgggagaacatccagcacgtgcaggggccg
ctcacctggcagcagttccataagatggcagggcgcgggacctatggttccgaagagtct
cctgagccgctgcccatccccactctgctggtgggctacgacaaggagttcttgaccatc
tcacccttctccttgcccttctgggagaggctgctcttggagccctatgggggccaccgt
gatgttgcttatattgtggtgtgtccagaaaatgaggccttgctcgaaggagccaaaact
ttcttcagggacttgagtgctgtatacgagatgtgtcggctgggacagcacaagcccatc
tgcaaagtgctccgtgatgggatcatgcgtgtgggcaagaccgtggcgcagaagctgaca
gaggagcttgtgagcgagtggtttaaccagccgtggagcagtgaggagagtgacaatcat
tccagactcaaactttatgctcaagtttgccgccatcacctagcaccttatttagccact
ctgcagctcgacagtggcctgctgatgccacctaagcaccagagcccaccagcagaagca
cagggacaagccacgcctgggaatgctgggtctttaccttcgaattcaggctcaggagca
cctccagctggcagtgcattcaatcccacctccagcagctctgcaaaccccacagcaagt
agttcatctgcctcctctgggccgccaggctcctcagctgcctctgctccaggcatcact
cagatgaacactacctcttcttcaggattcggtggtggtgttggagggcagaaccccagt
gcggggggcagctctacagatcgaaccccagggaatgtggcttgtggagacactgagcct
gggcagagctgcacccagtcctcacaggatggacaagacagtgttacagagagggagaga
ataggaatccccacggagcccgactctgcagacagccatgcctaccctccagccgtcgtc
atttacatggtggaccccttcacctacactgcggaggaggactccagctctggaaacttc
tggctgctgagcttgatgcgctgctacacggagatgctggatcacttacccgagcacatg
agaagctcgttcattctccagattgtgccttgccagtacatgctgcagaccatgaaggat
gagcatgttttctacattcaatacttgaagtccatggcgttctcagtgtactgccagtgc
aggcggcctctgcctacacagatccacattaaatctctcacaggcttcgggcctgcagcc
agcattgagatgaccctcaagaatccagagcggcccagtccaatccagctttattcccct
ccctttatattggccccaatcaaagacaagcagacagagccgggagagacctttggtgag
gcgagccagaaatacaatgtgctctttgtgggttattgtctgtctcatgaccagcgctgg
ctcttggcatcctgcactgacctgcatggggagttactggagacctgtgttgtaaatatt
gctttaccgagcaggacccttcatgttcctctgtctgtcaggtcacggaagagtaaagtg
tctgcgcggaaggtcgggctgcagaagctgtgggagtggtgcctgggcattgtccagatg
acgtctctgccctggagagttgtcattggccgcttggggcgtcttggccatggggagctg
aaagattggagtatcctccttggagaatgttcactgcagacaatcagcaaacagctcaag
gatgtgtgccgaatgtgtgggatctctgctgcagactctccttccatcctcagtgcctgc
ctggttgccatggagccccaggggtcctttgtagtgatgccagatgctgtcacaatgggc
tctgtgtttggccgaagcaccgcattgaacatgcagtcgtcccaactgaacacacctcag
gacgcctcctgcacccacatcttggtgttcccaacatcgtcaaccatccaggtggctcca
gccaactaccctaatgaggatgggtttagccccaacaatgatgacatgtttgtagacctt
ccattcccagacgacatggacaatgacattggcatcctcatgaccgggaacctccactcc
tctcccaactcctctccggttccctccccgggctctccctctggaatcggtgtgggctct
cacttccagcacagtcggagccagggagagcggcttctgtctcgggaggctccagaggaa
ctcaagcagcagcccctggcccttgggtattttgtgtccactgccaaagcagagaacctc
ccgcagtggttttggtcatcgtgcccccaggcccggaaccagtgcccactcttcctgaag
gcttccctgcatcaccacatctctgtagctcagacggatgagctccttcctgccaggacc
tctcagcgggctccgcaccctctggactccaagaccacatctgatgttctaaggtttgtg
ctggagcagtacaacgccctatcctggctcacgtgcaatccagccacccaggaccgcact
tcctgccttcccgtccacttcgtggtgctcacgcagctgtacaatgccatcatgaacatg
ctctaa
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