Mus caroli (Ryukyu mouse): 110294061
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Entry
110294061 CDS
T05910
Symbol
Psmc2
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03050
Proteasome
mcal05010
Alzheimer disease
mcal05012
Parkinson disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110294061 (Psmc2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110294061 (Psmc2)
09164 Neurodegenerative disease
05010 Alzheimer disease
110294061 (Psmc2)
05012 Parkinson disease
110294061 (Psmc2)
05014 Amyotrophic lateral sclerosis
110294061 (Psmc2)
05016 Huntington disease
110294061 (Psmc2)
05017 Spinocerebellar ataxia
110294061 (Psmc2)
05020 Prion disease
110294061 (Psmc2)
05022 Pathways of neurodegeneration - multiple diseases
110294061 (Psmc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mcal03051
]
110294061 (Psmc2)
Proteasome [BR:
mcal03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110294061 (Psmc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
AAA_7
Prot_ATP_ID_OB_C
AAA_33
AAA_18
TIP49
RNA_helicase
Mg_chelatase
Sigma54_activ_2
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-GeneID:
110294061
NCBI-ProteinID:
XP_021017721
Ensembl:
MGP_CAROLIEiJ_G0026993
UniProt:
A0A6P5PNH8
LinkDB
All DBs
Position
5:16784013..16800713
Genome browser
AA seq
433 aa
AA seq
DB search
MPDYLGADQRKTKEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccggattacctaggtgcggaccagcggaaaaccaaagaggaggagaaggacgacaag
cccatccgagctctggatgaaggggatattgccttgctgaaaacttacggccagagtaca
tattcaaggcagatcaagcaggttgaagatgacattcaacaactcctcaaaaaaattaat
gagctcactggtattaaagagtctgacactgggttggcacctccagccctctgggatttg
gctgcagacaaacaaacacttcagagtgaacagccattacaggtggcaagatgtacgaag
ataatcaacgctgattcggaggacccaaaatacatcatcaatgtgaagcagtttgccaag
ttcgtggtggatctcagtgatcaggtggcacccactgacatcgaagaagggatgagagtt
ggtgtggacagaaataaataccaaattcacattccactacctcctaagatcgacccaaca
gttaccatgatgcaggtggaggaaaaacccgacgtcacatacagcgatgttggtggctgt
aaggaacagattgagaaattgcgagaagtagttgaaacccctctgctccatccagagagg
tttgttaaccttggaatcgagcctccaaagggtgtactgctgtttgggccaccaggcaca
ggcaagacactctgtgctagggcagttgcgaatcggactgatgcttgcttcattcgagtt
attgggtctgagctcgtacagaaatacgtcggcgagggagctcgaatggttcgtgagctt
tttgaaatggccaggacaaaaaaagcctgccttattttctttgatgaaattgatgccatt
ggaggggctcggtttgacgatggcgctgggggtgacaatgaagtgcagagaaccatgctg
gagctcatcaatcagctggatggctttgatcctcgaggcaacatcaaggtgctcatggcc
actaaccgccctgacactctggacccagcgctcatgagaccggggagactggacaggaag
attgagttcagcttacctgacttagagggtcgaacgcacatctttaagattcacgctcgc
tcaatgagtgtggaaagagacattcgatttgagctgttggcccgcctgtgtccaaacagt
accggagcggagattagaagtgtttgcacagaagctggtatgtttgcaatccgagcacgg
agaaaaattgctacagagaaggacttcttagaagctgtaaataaggtcatcaagtcttac
gccaaattcagcgctactccccgctacatgacatacaattga
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