Mus caroli (Ryukyu mouse): 110294160
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Entry
110294160 CDS
T05910
Symbol
Smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04120
Ubiquitin mediated proteolysis
mcal04137
Mitophagy - animal
mcal04144
Endocytosis
mcal04340
Hedgehog signaling pathway
mcal04350
TGF-beta signaling pathway
mcal04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110294160 (Smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110294160 (Smurf1)
04350 TGF-beta signaling pathway
110294160 (Smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110294160 (Smurf1)
04137 Mitophagy - animal
110294160 (Smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
110294160 (Smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110294160 (Smurf1)
04121 Ubiquitin system [BR:
mcal04121
]
110294160 (Smurf1)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110294160 (Smurf1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110294160 (Smurf1)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110294160 (Smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
110294160 (Smurf1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
HECT type E3
110294160 (Smurf1)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110294160 (Smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
110294160
NCBI-ProteinID:
XP_021017834
Ensembl:
MGP_CAROLIEiJ_G0028003
UniProt:
A0A6P5PNQ1
LinkDB
All DBs
Position
5:complement(137567839..137657128)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGGGGSVVDCRGLLENEGTVYEDSGPGRPLSCLMEEPA
PYTDGTGAAAGGGNCRFVESPSQDQRLLVQRLRNPEVRGPLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLQLPSEGSMEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacccgtaggaacggctccagcatcaagattcgtctgacagtattg
tgtgccaagaaccttgcaaagaaagacttcttcagactccctgacccctttgccaagatt
gttgtggacggctctgggcagtgccactcaaccgacactgtgaaaaacaccctggaccca
aagtggaaccagcactatgacctgtacgttgggaaaacggactctataaccatcagtgtg
tggaaccacaagaagatccacaagaagcagggggctggcttcctgggctgtgtgcggctg
ctctccaatgccatcagcagattgaaagacactggctaccagcgtctggatctatgcaaa
ctaaatccctcagatactgatgcagttcgtggccaaatagtggtcagtttacagacccga
gacagaataggcggtggagggtcagtggtggactgcagagggctgctggagaacgaagga
acagtgtatgaagactcaggccctggaaggccgcttagctgcctcatggaggaacctgcc
ccgtatacagatggtactggtgcagcagcaggaggcgggaactgcaggtttgtggagtct
ccaagccaagatcagagactcctggtacagcgactccgaaatcctgaggttcgagggccc
ttacagacaccccagaaccgaccacatggccaccagtcgccggagctgcctgaaggctat
gagcaaaggacaacagtgcagggacaagtttactttttgcacacgcagactggagtcagc
acatggcacgaccccaggatccccagagaccttaacagtgtgaactgcgatgaacttggg
ccactgcctccaggctgggaagtccgaagcacagtgtcgggaagaatctattttgtagat
cacaataataggacaacccagtttacagatccacggcttcaccacatcatgaatcaccag
tgccaactcaaggagcccagccagccgctgcagctgcccagcgagggctccatggaggac
gaagagcttcctgcccagagatatgagagggacttagtccagaagctcaaagttctcagg
catgagctctctcttcagcagccccaggctggtcactgtcgaatagaagtctccagagaa
gagatatttgaggagtcgtatcgccagatcatgaagatgcggccaaaagacctaaagaag
cgcctgatggtgaagttccgaggggaggaaggtttggactatggtggagtggctcgggag
tggctgtatttgttgtgccatgaaatgttgaatccgtactatggactcttccagtattct
acggacaatatttacacactgcagatcaacccagattcttctatcaaccctgaccatctg
tcttacttccactttgtgggtcgcatcatgggtctagctgtgttccacggacactacata
aatgggggtttcacagttccgttctacaagcagctcctggggaagcccatccagctgtcg
gacctggagtcagtggacccagagctgcacaagagtttggtgtggattctagagaatgac
atcacgcctgtgttggatcataccttctgcgtggagcacaacgctttcgggcggattctc
cagcatgaactgaaacccaatggcagaaatgtgcctgtcactgaggagaacaagaaggaa
tatgtccggctgtacgtgaactggagatttatgagaggaatcgaagcccagttcttagcg
ctgcagaagggctttaacgaactcattccccaacacttgctgaagccctttgaccagaag
gaactagagctgataataggtgggctggataagatagacctgaacgactggaagtccaac
acccggttgaaacactgtatggcagacagcaacatcgtcaggtggttctggcaggcggtg
gagaccttcgatgaggagaggagagccagactcctgcagtttgtgacaggatccacaaga
gttcctctccaaggcttcaaggctctgcaaggctctacaggcgctgcagggccccggctg
ttcaccattcacctgatagacgccaatacagacaacctgcccaaggcccatacctgcttt
aaccggatcgacatcccaccctatgagtcctatgagaagctctatgagaagctgctgaca
gcggtggaggagacctgtggctttgcagtggagtga
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integrated database retrieval system
