Mus caroli (Ryukyu mouse): 110294171
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Entry
110294171 CDS
T05910
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110294171 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110294171 (Trim54)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110294171 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
DUF349
PHP
UvrD_C
Mod_r
COG2_C
FlgN
DUF1421
Zn_ribbon_FGT1_2
DUF5799
vATP-synt_E
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
110294171
NCBI-ProteinID:
XP_029332912
Ensembl:
MGP_CAROLIEiJ_G0027078
UniProt:
A0A6P7QX52
LinkDB
All DBs
Position
5:25609542..25630885
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AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHNMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEGSSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFQPGATGDEEDDDVALDGEEGNAGLEEERLDVP
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacggtgggtttcaagccgctgctaggggatgcgcacaacatggacaacttg
gagaagcagctcatttgccccatctgcctggagatgttctccaagcccgtggtgatcttg
ccttgccaacacaacctgtgccgcaagtgtgccaacgacgtctttcaggcctctaatcct
ctgtggcaatcccggggctccacaacggtgtcttcaggaggacgtttccgatgcccatct
tgtaggcacgaggttgtcctggacaggcatggggtctatggcctgcagcggaacctgcta
gtggagaacatcattgacatctacaaacaggagtcctcccggccactgcatgccaaggct
gaacagcacctcatgtgtgaggagcacgaggatgagaagatcaacatctactgcctgagc
tgcgaggtgcccacctgctctctctgcaaggtctttggcgcccacaaggactgtgaggtg
gcccctctgcccaccatttacaaacgccagaagagtgagctgagcgatggtatcgcgatg
ctggtggcgggcaatgaccgagtgcaggcagtgatcacgcagatggaggaggtgtgccag
accattgaggacaacagccgcagacagaagcaactgttaaaccagaggttcgaaaccctg
tgcgcggttttggaggagcgcaagggcgagctgcttcaagcactggcccgggagcaggag
gagaagttgcagcgcgtgcggggcctcatccgccagtacggagaccacttggagggctcc
tcgaagctggtggagtccgccatccagtccatggaggagccgcagatggctctctacctc
cagcaggcaaaggagctgatcaacaaggtcggggcaatgtcgaaggtggagctggcagga
cggccggagccaggctacgagagcatggagcaattctctgtgagcgtggagcacgtggcc
gaaatgttgcgaaccatcgacttccagcccggcgccactggggatgaagaggatgacgac
gtggctttggatggggaggagggcaatgcggggctggaggaggagcggctggacgtgcca
gaaggcctgcactga
DBGET
integrated database retrieval system
