Mus caroli (Ryukyu mouse): 110294180 Help Entry 110294180         CDS       T05910                                  Symbol Depdc5 Name (RefSeq) GATOR complex protein DEPDC5   KO K20404   SEA/GATOR complex protein SEA1/DEPDC5 Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04150   mTOR signaling pathway Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09132 Signal transduction    04150 mTOR signaling pathway     110294180 (Depdc5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mcal04131]     110294180 (Depdc5) Membrane trafficking [BR:mcal04131]  Autophagy   Other autophagy associated proteins    SEACIT/GATOR1 complex     110294180 (Depdc5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEPDC5_CTD IML1 IML1_N DEP Motif Other DBs NCBI-GeneID:  110294180 NCBI-ProteinID:  XP_029333205 Ensembl:  MGP_CAROLIEiJ_G0027107 UniProt:  A0A6P7R8F0 LinkDB All DBs Position 5:27813307..27941471 Genome browser AA seq 1569 aa AA seqDB search MRTTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEETRVVFRSTSAMVYIFIQMSCE MWDFDIYGDLYFEKAVNGFLADLFTKWKSDEFPEVNRASIQEDHKGRFYEDFYKVVVQNE RREEWTSLLVTIKKLFIQYPVLVRLEQAGGFPQGDNSTSAQGNYLEAINLSFNVFDKHYI NRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKL HNRSVPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFTPRIKLAGKKSASEKTKSGRDPS LGTPKESENTLPIQVDYDAYDAQVFRLPGPSRAQRLATCRSVREQENHSRKSASSCDVSS SPSLPSRALPTEEVRSQASDDSSLGKSTNILMIPNPHLHQYEVSSSLGYTSTRDVLENMI EPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFP VGPSGEAIQIHHQTRQNMAELQGSRQRDPTHSSAELLELAYHEAAGRHSTSRQPGDSMSL NFSGTEELSVSLLSNSSTGVTPRTQNKDSLEDSVSTSPDPMPGFCCTVGVDWKSLTTPAC LPLTTDYFPDRQGLQNDYTEGCYDLLPEADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQ IIVQPKAQKPNTTVPPPLSSSPLYSRGLVSRNRPEEEGQYWLSMGRTFHKVTLKDKMITV TRYLPKYPYESAQIHYTYSLCPSHSDSEFVSCWVDFCHERLEEYKWNYLDQYICSAGSED FSLIESLKFWRTRFLLLPACVTATKRITEGEVHCDIYGDKPRADEDEWQLLDGFIRFVEG LNRIRRRHRSDRMIRKGTAMKGLQMTGPISAHSLESTGPPVGKKGTSALSALLEMEASQK SLGEQQTTVHGKSSTQPAENSSVAMTPTYVDSPRKDGAFFMEFVRSPRTASSAFYPQASV DQTAPLVLDSTSLGVSTCQPMDRGNNQTFGNAQNLEQAFPSANSGDYSSQQHVASSLTSS STLVEILEAMKHPSTGVQLLSEQKGLSPCCFISAEVVHWLMNNVEGVQTQAMGIDIMQKM LEEQLITHASGEAWRTFIYGFYFYKIVMDKEPERVAMQQPSAPWHTAGADDFASFQRKWF EVAFVAEELVHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTV TLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTATVLFEMVQGWHRKATSCGF LLVPVLEGPFALPSYLYGDPLRAQLFIPLNLSCLLKEGSEHLFDSFEPETYWDRMHLFQE AIAHRFGFVQDKYSVSAFNFPAENKPQYIHVTGTVFLQLPYSKRKFSGQQRRRRNSTSST NQNMFCEERVGYNWAYNTMLTKTWRSSATGDEKFADRLLKDFTDFCINRDNRLVTFWTNC LEKMHASAP NT seq 4710 nt NT seq  +upstreamnt  +downstreamnt atgagaaccacaaaggtctacaaacttgtcatccacaagaagggctttgggggcagtgat gatgagctagtcgtgaaccctaaagtatttcctcacatcaaacttggagacattgtggag attgctcaccccaatgatgagtacagtcctttgcttttgcaagtcaagtctcttaaggaa gatttacagaaagaaactatcagtgtggaccagactgtgactcaagtattccggctaaga ccttatcaagatgtctatgtgaatgttgtagaccccaaggatgtgactcttgacctggtg gaattgacttttaaggatcagtatattggccgtggggatatgtggcgactaaagaaaagt ttggtgagcacctgtgcctatatcactcaaaaagtggaatttgctggcatcagggcacag gctggtgagctgtgggtcaagaatgagaaggtcatgtgtggttacattagtgaagagacc agggtggtgttccgttctacgtcggctatggtttacatatttattcagatgagctgtgaa atgtgggattttgatatttatggggatctgtactttgagaaagctgtgaacggtttcctc gccgacctgtttactaaatggaagtcagatgaatttcctgaagtgaaccgagcttcaatt caagaggatcacaaagggagattctatgaggacttttacaaagtggtggtgcagaatgag agaagggaagagtggacttcactcctcgtgaccattaaaaaactcttcatccagtatcca gtgttggtgcgactggaacaggcagggggctttcctcaaggagacaattctacctcagca caaggaaactacctagaggccatcaacttgtcattcaatgtgtttgacaagcactacatc aaccgaaactttgaccgaactgggcagatgtctgtggtgatcacgccaggggtgggtgtc tttgaagtggaccgcctactcatgatcttgaccaagcagcggatgattgataatggaatt ggtgtggatttagtgtgcatgggagagcagccattacatgctgtgccattattcaagcta cacaaccggagtgttccgagggattctcgactgggtgatgattataatattcctcactgg ataaaccacagtttctacacatccaaaagccagctcttttgtaacagtttcactccacgg ataaaactagcagggaagaagtctgcctctgagaaaaccaaaagtggtcgggatccatct ctcgggactccaaaggaatctgaaaacacccttcccatccaagtagattatgatgcctac gatgctcaagtgttcaggctgcctggcccatcccgggctcagcgcctcgccacctgcagg tctgtgagagaacaggagaatcacagtcgcaaaagtgcgagctcctgtgatgtctcatcc agcccttccctgccaagccgtgcactgcccactgaggaagtgaggagccaggcttctgat gacagctccctgggcaagagcaccaacatcctgatgatccctaacccccacctgcaccag tatgaagtcagcagctcactgggctacaccagcacccgagatgtcctggagaacatgata gaacctccacagagggactcgagtgcaccaggaaggttccatgtgggtagtgcagagtcc atgctccacgtccgacctggaggatacacgcctcagagagcgctgattaaccccttcgcc ccctcgaggatgcccatgaagctcacctccaacagaaggcgctggatgcacacttttcct gtaggcccatctggagaggccatccagatccatcatcagacccggcaaaacatggcagag ctgcagggcagcaggcagagggaccccacccactcctctgcagagctgttggagttggca taccatgaagctgccggaaggcacagcacttcccgccagcctggtgacagcatgtccttg aacttcagtggaacggaagagctttctgtcagcctgcttagcaacagcagtacaggtgtg actcctaggacccagaacaaggactctctagaggacagtgtttctacctctccagaccca atgccaggcttctgttgcacagttggagtggactggaagtctcttactactcctgcatgc cttcccctcaccactgactacttcccggaccgtcagggcctgcagaatgactacacagag ggctgctatgatctcctcccagaagcagacatggacaggagggatgaggagggtgttcaa atgacagcccagcaagtgtttgaagagttcatttgccagcgtctcatgcagggttaccaa atcatagtacagccaaaggcccagaaacccaacaccacagtcccacccccattgagcagt agcccactctatagcagaggccttgtgtcccgaaaccgccctgaggaggaaggccagtat tggctgagtatgggcagaactttccataaggtgacactcaaggacaagatgatcacagta actcgttaccttcccaagtacccttatgaatctgcccagatccattacacctacagcctc tgcccttcccactctgactcggagtttgtctcctgttgggtggatttctgccacgaacgg ctcgaggaatacaagtggaattacttagatcagtatatttgttctgctggctctgaagac ttcagcttaatcgagtctctgaagttctggagaacccgatttttactactgccagcctgt gttactgccaccaagcgcatcacagaaggggaggtgcactgtgacatctatggggacaaa ccccgtgcagatgaagatgagtggcagcttctagatggctttattcgctttgtagagggc ttaaatcgcatccgcaggcgccaccgctcagaccgcatgattcggaaggggactgccatg aaaggcttgcagatgaccgggcccatctctgcacactctctcgagtcaacaggccctcca gtcggcaagaaaggaacctcagctctgtctgccctgttggagatggaagctagtcagaag agcctaggagaacagcagacgactgtgcacggaaaaagctccactcagccagctgagaac agcagtgttgccatgactcccacctatgtggacagcccacgcaaggacggggccttcttt atggagtttgtccgcagcccacgcacagcatcatctgccttctaccctcaggcatctgtg gaccaaacagctcctctggtgttagacagcaccagtttaggggtcagcacatgccagccc atggatagaggcaacaaccagacctttgggaacgcccagaacttagaacaggcctttccc tctgcaaactctggtgactacagctctcagcagcatgtagcaagctctctaacgtcgtct tctacgctggtggagattctggaagccatgaagcatccctcgacaggagtccagctgctg tctgaacagaagggcctttcaccgtgctgcttcatcagtgctgaggtcgtacactggttg atgaacaacgtggaaggggtccagacgcaggcgatgggcatagacatcatgcagaaaatg ctggaagagcagctcataacgcatgcatctggtgaagcatggcggaccttcatctatggc ttctatttctacaagatagtaatggacaaagaaccggaaagagtggctatgcaacagccc tctgccccctggcacacagcaggagcggatgactttgccagcttccaacgcaagtggttt gaggtggcctttgtggcagaagagcttgtgcactctgagattcctgccttcctcctgccc tggctacctagccggccagcctcttatgcaagcagacacagctcctttagccgaagtttt ggaggacggagccaggcggctgcgctgttagctgccactgtcccagagcagaggactgtg accctggatgttgatgtgaacaaccgaacggaccggctggaatggtgcagctgttactac catggaaacttctctctcaatgcggcctttgagatcaagctacactggatggcagtgact gccacagtactgtttgagatggtccaaggttggcatcgaaaagctacctcctgtggcttc ttgctggtcccagttttggagggtccttttgcactgcccagttacctgtatggtgatccc ctgagggcccagctcttcatcccactcaacctcagctgcttgctcaaggagggcagcgag cacctgttcgatagctttgaaccagagacatattgggatcgaatgcaccttttccaggaa gccattgcacacaggtttggatttgtgcaagataaatactctgtctccgcttttaacttc cctgctgagaataagccacagtatatccatgtcacaggaacggtgttccttcagctgccg tactcgaaacgcaagttttctgggcagcagcggcggcgacggaactctaccagctccacc aaccaaaacatgttctgtgaggagcgggttggctacaactgggcctacaacaccatgctg accaagacatggcgctctagtgccacaggggacgagaagttcgctgatcggctgctgaag gacttcacggatttctgcatcaaccgtgacaaccgactggtcacattctggacaaactgc ctggagaagatgcatgccagtgctccatga

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