Mus caroli (Ryukyu mouse): 110294227
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Entry
110294227 CDS
T05910
Symbol
Pkd2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110294227 (Pkd2)
04040 Ion channels [BR:
mcal04040
]
110294227 (Pkd2)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110294227 (Pkd2)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110294227 (Pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
CBP_BcsS
Motif
Other DBs
NCBI-GeneID:
110294227
NCBI-ProteinID:
XP_021017949
Ensembl:
MGP_CAROLIEiJ_G0027481
UniProt:
A0A6P5PVG8
LinkDB
All DBs
Position
5:97264118..97306025
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AA seq
966 aa
AA seq
DB search
MVNSRRVQPQPPGDAGRSPAPRASGPGRLVAGGAGLAVPGGLGEQRGLEIEMERIRQAAA
RDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEDDDDEEVEGEEGGMVVEMDVEWRPGS
RRSASSSAVSSVGARGRGLGSYRGAAHLSGRRRRLEDQGAQCPSPVGGGDPLHRHLPLEG
QPPRVAWAERLVRGLRGLWGTRLMEESNANREKYLKSVLRELVTYLFFLIVLCILTYGMM
SSNVYYYTRTLSQLFIDTPVSKTEKTNFKTLSSMEDFWKFTEGSFLDGLYWKAQTSNHTQ
ADNRSFIFYENLLLGVPRLRQLRVRNGSCSIPQDLRDEIKECYDVYSVSSEDRAPFGPRN
GTAWIYTSEKELNGSSHWGIIASYSGAGYYLDLSRTREETAAQLAGLRRNFWLDRGTRAA
FIDFSVYNANINLFCVVRLLAEFPATGGVVPSWQFQPVKLIRYVTAFDFFLAACEIIFCF
FIIYYVVEEILEIRIHRLSYFRSFWNCLDVVIVVLSVVAMVINIYRMSNAEGLLQFLEDQ
NSFPNFEHVAYWQIQFNNIAAVMVFLVWIKLFKFINFNRTMSQLSTTMSRCAKDLFGFTI
MFSIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEANRVLGPLYFT
TFVFFMFFILLNMFLAIINDSYSEVKSDLAQQKAEMELSDLIRKGCQKALVKLKLKRNTV
DAISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEREHQQMRDDL
EKEREGLDLEHSSLPRPMSSRSFPRSLDDSEEEDDEDSGHSSRRRGSISSGVSYEEFQVL
VRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDARLGRDSEIHR
EQMERLVREELERWESDDAASQTGHGVSTQVGLGGQPHPRNSRPPSSQSAEGLEGGGGNG
SANVHA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggttaactccagacgcgtgcagccgcagccgcccggggacgcggggcgctcgcccgcg
ccgcgagcgtccggacccgggcgcctggtggcgggtggcgccggcctagccgtccccggc
ggcctcggggagcagcggggcctggagatcgagatggagcgcatccggcaggcggccgct
cgggatcccccggccggagcctcggcctcgccgtctcctccgctttcgtcctgctccagg
caagcgtggagccgcgacaacccgggctttgaggcagaagaggatgacgacgacgaggag
gtggaaggagaagaaggagggatggtggtagagatggatgtggagtggcgcccgggcagt
cggaggtcggcctcctcctccgccgtgagctcggtgggcgcccgcggccgagggctcggg
agctaccgcggcgcggctcacctgagcgggaggcggcgccggctagaggaccagggcgcg
cagtgtcccagccccgtgggcggcggggacccgctgcatcgccacctcccgctggaaggc
cagccgccccgagtggcctgggcagagaggctggtgcgagggctgcgaggtctctgggga
acaagactcatggaagagagcaacgccaaccgagagaagtacctgaaaagtgtgttacgg
gagctggtcacttacctctttttcctcatagtcttgtgcatcttgacctacggcatgatg
agctccaatgtgtactactacactcggacactgtcacagctattcatagacaccccagtg
tcgaaaacagagaaaaccaactttaaaactctttcttccatggaagacttctggaagttc
accgaaggctccttcctggatgggctgtactggaaggcacagaccagcaaccacacgcaa
gctgacaaccgaagctttatcttctatgagaacctgctgctaggagtgccgcgtctacgc
caactccgagtcagaaacggatcctgctccatccctcaggacctgcgagatgaaattaaa
gagtgctatgatgtctactccgtcagcagtgaggacagagctccatttggacctcggaat
ggaactgcgtggatctacacaagtgagaaggagctgaatgggagcagtcactggggaatc
attgcgtcgtacagtggagcaggttactacctggatctgtccagaaccagggaggagaca
gccgcccagcttgctggcctcaggaggaacttctggctggaccggggcacgagggcagct
ttcatagacttctcagtgtataacgcaaacattaacctgttctgtgtggtcaggttattg
gcggagttcccagcaacgggtggcgtagtaccctcttggcagtttcagcctgtaaaactg
atccgctatgtcacagcctttgatttcttcttggcagcctgtgagatcatcttttgtttc
tttatcatttactatgtggtggaagagatattggaaattcggattcacagactgagctat
ttcaggagtttctggaattgtctggatgttgtgattgtcgtgttatcggtagtagccatg
gtgattaacatttaccgaatgtcaaatgcagaggggctgctacagtttctcgaagatcaa
aattctttccccaactttgagcatgtggcatactggcaaatacagttcaacaatatagct
gctgtcatggtatttttggtctggattaagctcttcaaattcatcaattttaataggacc
atgagccagctttccacaaccatgtctcgatgtgccaaagacctcttcggcttcaccata
atgttctccatcatcttcttggcatacgcacagctggcataccttgtcttcggcacccag
gtcgatgacttcagcactttccaagaatgtatcttcacccagttccgcatcattttgggt
gatatcaacttcgcagagatcgaggaagctaaccgagttttggggccactttattttact
acatttgtgttctttatgttcttcattcttttgaatatgttcctggcgatcatcaatgat
tcgtactctgaagtgaaatccgatctggcccagcagaaagcagaaatggaactctcagac
cttatcagaaagggctgccaaaaagcactggtcaaactaaaactgaaaagaaacaccgta
gatgccatttcagagagtctccggcaaggtggtggcaaactaaactttgatgagcttcgg
caagacctgaaagggaagggccatacagatgcagagattgaggccatattcactaaatat
gaccaggacggcgaccaggaactgactgagcgtgagcatcaacagatgagagatgacttg
gagaaagagagggagggcctggacttggaacacagctctttaccacgtccgatgagcagc
agaagtttccccagaagcctggatgactctgaggaggaggatgacgaagacagtggccat
agctccaggaggaggggaagcatctccagtggggtttcctatgaagagttccaagtactg
gtgaggcgcgtggaccgcatggagcactccattggcagcatcgtttccaagattgacgct
gtgattgtcaagctggagatcatggagcgggccaagctgaagagacgagaggtgttagga
cggctgctggatggtgtggctgaggatgcgcgactgggtcgggacagtgagatccacaga
gagcagatggagcgcctggtgcgggaagagctggagcgctgggaatcggatgatgcagct
tcgcaaacaggtcatggtgtaagcacacaagtgggactcggtggccagccgcaccccaga
aactcgcgccctccttcctcccagtctgcagagggcctggaaggtggaggtggaaatgga
agtgccaacgtccatgcctaa
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