Mus caroli (Ryukyu mouse): 110294246
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Entry
110294246 CDS
T05910
Symbol
Cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03015
mRNA surveillance pathway
mcal05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110294246 (Cpsf4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110294246 (Cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110294246 (Cpsf4)
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110294246 (Cpsf4)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110294246 (Cpsf4)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110294246 (Cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
110294246
NCBI-ProteinID:
XP_021017992
Ensembl:
MGP_CAROLIEiJ_G0028012
UniProt:
A0A6P5PQ67
LinkDB
All DBs
Position
5:137860001..137874919
Genome browser
AA seq
269 aa
AA seq
DB search
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRAPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcatcgccagcgtggatcacatcaagttcgacttggagatcgccgtggag
cagcagctcggggcgcagccgctgcccttccccggcatggataagtcgggggctgctgtc
tgtgaattctttttgaaagctgcctgtggcaaagggggcatgtgcccattccgccacatc
agtggtgagaagacagttgtgtgcaaacactggctgagaggactgtgcaagaaaggggac
cagtgtgagttcttgcatgaatatgacatgaccaagatgcctgagtgctacttttactcc
aagttcggggaatgcagcaataaggagtgccccttcctgcacatcgatcctgaatccaag
atcaaggactgcccttggtatgaccgcggcttctgtaagcatggtcccctgtgtaggcat
cggcacacccggagagtcatttgtgtgaactatcttgttggattctgccctgagggacca
tcatgtaaattcatgcaccctcgatttgaactgcccatggggaccactgagcaaccccca
ctaccgcagcagacacagcctccaacaaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaaccagcagagagccccgcag
gtcattggggtcatgcagagtcaaaacagcagtgcgggcaaccggggaccccggccgctg
gagcaagtcacttgctacaagtgtggtgagaaaggacactacgccaacagatgcaccaaa
gggcatttggcctttctcagtggacagtga
DBGET
integrated database retrieval system
